RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PPM1EQ8WY54 764 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 KCNN1Q92952 543 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 HLA-CQ95604 372 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 EPSTI1Q96J88 318 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 TMEM175Q9BSA9 504 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 TCHPQ9BT92 498 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 MAGEF1Q9HAY2 307 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PARVGQ9HBI0 331 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 NGRNQ9NPE2 291 aaKnown RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 ARHGAP28Q9P2N2 729 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 THEGQ9P2T0 379 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 TNFSF13BQ9Y275 285 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 IPPQ9Y573 584 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 EPOPA6NHQ4 379 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TRAK2O60296 914 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 ITGB1P05556 798 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 LINC00271P0C7V0 271 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 SRGAP2BP0DMP2 458 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 MAPTP10636 758 aaKnown RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 GAP43P17677 238 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 LIG1P18858 919 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 ME1P48163 572 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 YARSP54577 528 aaKnown RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 BCAR1P56945 870 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 DHX8Q14562 1220 aaKnown RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 MCM6Q14566 821 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 ZPBP2Q6X784 338 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 AGMOQ6ZNB7 445 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 STXBP4Q6ZWJ1 553 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 KCNK18Q7Z418 384 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 HAUS6Q7Z4H7 955 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 MYCT1Q8N699 235 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 POF1BQ8WVV4 589 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 BSNDQ8WZ55 320 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 MRPS27Q92552 414 aaKnown RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TMEM169Q96HH4 297 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CCDC34Q96HJ3 373 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CPB2Q96IY4 423 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CLIC6Q96NY7 704 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TSPAN18Q96SJ8 248 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CDCA3Q99618 268 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CCDC94Q9BW85 323 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 COLEC11Q9BWP8 271 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 SCAND2PQ9GZW5 306 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 CWH43Q9H720 699 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TLR9Q9NR96 1032 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 TBC1D13Q9NVG8 400 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 RCOR1Q9UKL0 485 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 FAM50BQ9Y247 325 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 SSX2IPQ9Y2D8 614 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 INPP5FQ9Y2H2 1132 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 FAN1Q9Y2M0 1017 aa8.63□□□□□ -1.03
PSEN1-222ENST00000557356 SIP14410 1827 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 ARL5CA6NH57 179 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 SFI1A8K8P3 1242 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 GRM6O15303 877 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 SLC16A4O15374 487 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 CLDN3O15551 220 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 B4GALT5O43286 388 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 ZC3H11AO75152 810 aaKnown RBP eCLIP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 TOM1L1O75674 476 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 NPTXRO95502 500 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 BRD1O95696 1058 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 THP07101 528 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 GALTP07902 379 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 MCF2P10911 925 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 GATMP50440 423 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 ZNF131P52739 623 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 GRIN1Q05586 938 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 RAD51AP2Q09MP3 1159 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 GRIK3Q13003 919 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 MAPK7Q13164 816 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 ALCAMQ13740 583 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 HSP90AA2PQ14568 343 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 POSTNQ15063 836 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 ARSHQ5FYA8 562 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 SLFN12LQ6IEE8 588 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 LRRC55Q6ZSA7 311 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 TMC7Q7Z402 723 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 DDX53Q86TM3 631 aaKnown RBP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 FAM178BQ8IXR5 827 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 CCDC65Q8IXS2 484 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 DAW1Q8N136 415 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 SLC39A11Q8N1S5 342 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 TMEM161BQ8NDZ6 487 aa8.62□□□□□ -1.03
PSEN1-222ENST00000557356 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-222ENST00000557356 LPPQ93052 612 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms