RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 RNF149Q8NC42 400 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 CNNM3Q8NE01 707 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 GPR152Q8TDT2 470 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 NXPE3Q969Y0 559 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 ZNF707Q96C28 371 aaPredicted RBP13.75□□□□□ -0.21
SNX6-209ENST00000557265 RMDN1Q96DB5 314 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 MBOAT7Q96N66 472 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 AGXT2Q9BYV1 514 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
SNX6-209ENST00000557265 DDX25Q9UHL0 483 aaKnown RBP13.75□□□□□ -0.21
SNX6-209ENST00000557265 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 M0R2N6 131 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 SLC37A4O43826 429 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 GAS2O43903 313 aaKnown RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 CDC45O75419 566 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 EFEMP2O95967 443 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 RPS6KB1P23443 525 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 MLH1P40692 756 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 DSG1Q02413 1049 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 DSC1Q08554 894 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 EXOC8Q8IYI6 725 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 B3GALT6Q96L58 329 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 GAD1Q99259 594 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNX6-209ENST00000557265 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
SNX6-209ENST00000557265 SIT1Q9Y3P8 196 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 HES2Q9Y543 173 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 IPPQ9Y573 584 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
SNX6-209ENST00000557265 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
SNX6-209ENST00000557265 ASAP2O43150 1006 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 TGM5O43548 720 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNX6-209ENST00000557265 NR1I2O75469 434 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 ERLIN2O94905 339 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 LAMP2P13473 410 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 HSPA4P34932 840 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 RFC5P40937 340 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 SCNN1GP51170 649 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
SNX6-209ENST00000557265 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 INF2Q27J81 1249 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 PHLDB3Q6NSJ2 640 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 GET4Q7L5D6 327 aaPredicted RBP13.73□□□□□ -0.21
SNX6-209ENST00000557265 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 FERMT3Q86UX7 667 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 ST13P5Q8NFI4 369 aaPredicted RBP13.73□□□□□ -0.21
SNX6-209ENST00000557265 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 PRKD2Q9BZL6 878 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 PLEKHA4Q9H4M7 779 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 CHST7Q9NS84 486 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 DLGAP2Q9P1A6 1054 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 PPME1Q9Y570 386 aa13.73□□□□□ -0.21
SNX6-209ENST00000557265 NCOR2Q9Y618 2525 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 ANHXE9PGG2 379 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 TSPAN1O60635 241 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 PAPLNO95428 1278 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
SNX6-209ENST00000557265 SP9P0CG40 484 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 EVCP57679 992 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 NCBP1Q09161 790 aaKnown RBP13.72□□□□□ -0.21
SNX6-209ENST00000557265 HTR4Q13639 388 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 EMC2Q15006 297 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 NPY5RQ15761 445 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 LILRA6Q6PI73 481 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 DCLRE1AQ6PJP8 1040 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 ZC3H14Q6PJT7 736 aaKnown RBP13.72□□□□□ -0.21
SNX6-209ENST00000557265 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 TCP11Q8WWU5 503 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 HINFPQ9BQA5 517 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 GPR62Q9BZJ7 368 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 ZDHHC7Q9NXF8 308 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 NUMBLQ9Y6R0 609 aa13.72□□□□□ -0.21
SNX6-209ENST00000557265 C1RP00736 705 aa13.71□□□□□ -0.21
SNX6-209ENST00000557265 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
SNX6-209ENST00000557265 PSMA5P28066 241 aa13.71□□□□□ -0.21
SNX6-209ENST00000557265 AXLP30530 894 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms