RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	MYO9B	Q13459	2157 aa		13.37	□□□□□ -0.27
KLC1-222	ENST00000557143	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	SFI1	A8K8P3	1242 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	GAS2	O43903	313 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	OFD1	O75665	1012 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	FGF18	O76093	207 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	EOMES	O95936	686 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	BMP1	P13497	986 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	ARF4	P18085	180 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	LIG1	P18858	919 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	MRPS5	P82675	430 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	RBM10	P98175	930 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	CEBPZ	Q03701	1054 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	DLX2	Q07687	328 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	RAD51AP2	Q09MP3	1159 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	SF3A1	Q15459	793 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	SPECC1	Q5M775	1068 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	USP49	Q70CQ1	688 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	MRPL10	Q7Z7H8	261 aa	Known RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	TMEM173	Q86WV6	379 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	ZNF280B	Q86YH2	543 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	HLA-C	Q95604	372 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	TRAIP	Q9BWF2	469 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	PLVAP	Q9BX97	442 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	KRTAP3-3	Q9BYR6	98 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	KRTAP3-2	Q9BYR7	98 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	CXCL16	Q9H2A7	254 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	MIOS	Q9NXC5	875 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	WDR81	Q562E7	1941 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143	LOXHD1	Q8IVV2	1947 aa		13.36	□□□□□ -0.27
KLC1-222	ENST00000557143		H3BQ06	376 aa	Predicted RBP	13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	LAD1	O00515	517 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	ZNF623	O75123	536 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	DDHD2	O94830	711 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	EYA4	O95677	639 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	MARCKS	P29966	332 aa	Predicted RBP	13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	POU5F1B	Q06416	359 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	PTPRO	Q16827	1216 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	KRT79	Q5XKE5	535 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	KCNT2	Q6UVM3	1135 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	EP400NL	Q6ZTU2	488 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	RBM23	Q86U06	439 aa	Known RBP	13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	P2RX5	Q93086	422 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	APOL6	Q9BWW8	343 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	GBP3	Q9H0R5	595 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	UBE2Z	Q9H832	354 aa	Predicted RBP	13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	DACT1	Q9NYF0	836 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	DNAJB4	Q9UDY4	337 aa		13.35	□□□□□ -0.27
KLC1-222	ENST00000557143	PER2	O15055	1255 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	HIP1R	O75146	1068 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	ERLIN2	O94905	339 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	POMC	P01189	267 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	KCNA5	P22460	613 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	AKAP5	P24588	427 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	SSTR3	P32745	418 aa	Predicted RBP	13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	LTBR	P36941	435 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	BCAR1	P56945	870 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	MAPK7	Q13164	816 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	TFDP1	Q14186	410 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	PTPA	Q15257	358 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	NOMO2	Q5JPE7	1267 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	TJAP1	Q5JTD0	557 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	EEF1DP3	Q658K8	133 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	HAUS3	Q68CZ6	603 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	RINT1	Q6NUQ1	792 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	C1orf186	Q6ZWK4	172 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	BRAP	Q7Z569	592 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	THNSL1	Q8IYQ7	743 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	ABI1	Q8IZP0	508 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	MCPH1	Q8NEM0	835 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	SNX21	Q969T3	373 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	INTS4	Q96HW7	963 aa	Known RBP	13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	CLIC6	Q96NY7	704 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	CSRNP2	Q9H175	543 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	FZD8	Q9H461	694 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	NXF3	Q9H4D5	531 aa	Known RBP	13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	NSUN3	Q9H649	340 aa	Known RBP	13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	NRDE2	Q9H7Z3	1164 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	TBC1D13	Q9NVG8	400 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	DNM3	Q9UQ16	869 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	RWDD3	Q9Y3V2	267 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	IPP	Q9Y573	584 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143	PCDHB12	Q9Y5F1	795 aa		13.34	□□□□□ -0.27
KLC1-222	ENST00000557143		F8W810	466 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	NPTXR	O95502	500 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	SSB	P05455	408 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	MUT	P22033	750 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	SLC11A1	P49279	550 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	DHX8	Q14562	1220 aa	Known RBP	13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	CLUL1	Q15846	466 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	TMEM119	Q4V9L6	283 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	ARSH	Q5FYA8	562 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	HYI	Q5T013	277 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	NT5DC1	Q5TFE4	455 aa		13.33	□□□□□ -0.28
KLC1-222	ENST00000557143	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms