RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 COMTP21964 271 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 MAPK4P31152 587 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 GPC5P78333 572 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 CALCOCO2Q13137 446 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 LLGL2Q6P1M3 1020 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 SLC7A3Q8WY07 619 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 KRT35Q92764 455 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 MBOAT7Q96N66 472 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 FMO2Q99518 471 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 TELO2Q9Y4R8 837 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 FRMD3A2A2Y4 597 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 MYO1CO00159 1063 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 PRLRP16471 622 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 CTNNA2P26232 953 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 TMEM270Q6UE05 265 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 CPNE8Q86YQ8 564 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 ZNF280CQ8ND82 737 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 VGLL3A8MV65 326 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ATF7P17544 494 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 IRX3P78415 501 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 KRT76Q01546 638 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 KRT39Q6A163 491 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 LRRC31Q6UY01 552 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 AGBL3Q8NEM8 1001 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ZNF564Q8TBZ8 553 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 AENQ8WTP8 325 aaKnown RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ADAM33Q9BZ11 813 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 PRKCEQ02156 737 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 MTM1Q13496 603 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 THNSL1Q8IYQ7 743 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 HAUS1Q96CS2 278 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ANKRD62A6NC57 917 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ZNF233A6NK53 670 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 MYO1FO00160 1098 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 CCNE2O96020 404 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 IFNB1P01574 187 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ADRB2P07550 413 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 LPAR1Q92633 364 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 ZBTB45Q96K62 511 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 PXMP2Q9NR77 195 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 NXF1Q9UBU9 619 aaKnown RBP16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
TMEM55B-207ENST00000557041 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 PSAPP07602 524 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 IRAK1P51617 712 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 TFAMQ00059 246 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 FBXL13Q8NEE6 735 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 TARS2Q9BW92 718 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 VIPAS39Q9H9C1 493 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 LAMB2P55268 1798 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 AGPSO00116 658 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 ACSL3O95573 720 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 NSFP46459 744 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 FKBP1AP62942 108 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 PPP2R5AQ15172 486 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 CCDC38Q502W7 563 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 RAB17Q9H0T7 212 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 RASSF4Q9H2L5 321 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 MLXIPLQ9NP71 852 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 VWA5AO00534 786 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 CLDN3O15551 220 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 GUCY2CP25092 1073 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 FLT3P36888 993 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 MARSP56192 900 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 BRDTQ58F21 947 aaPredicted RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 MKNK1Q9BUB5 465 aa16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
TMEM55B-207ENST00000557041 INO80B-WBP1J3KQ70 363 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 THAP12O43422 761 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 JAK3P52333 1124 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 DENND2CQ68D51 928 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 DCUN1D2Q6PH85 259 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 ZNF662Q6ZS27 426 aa16.48■□□□□ 0.23
TMEM55B-207ENST00000557041 FAM83AQ86UY5 434 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms