RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 CCL16O15467 120 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
ABCD4-226ENST00000556971 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
ABCD4-226ENST00000556971 GBP1P32455 592 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 GLUD2P49448 558 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 MRPS9P82933 396 aaKnown RBP13.94□□□□□ -0.18
ABCD4-226ENST00000556971 LMAN2Q12907 356 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 PKN3Q6P5Z2 889 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 GPR155Q7Z3F1 870 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 PRICKLE2Q7Z3G6 844 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 IRF7Q92985 503 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 ELSPBP1Q96BH3 223 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 TRMT61BQ9BVS5 477 aaKnown RBP13.94□□□□□ -0.18
ABCD4-226ENST00000556971 RXFP1Q9HBX9 757 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 HCFC1R1Q9NWW0 138 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 GON4LQ3T8J9 2241 aa13.94□□□□□ -0.18
ABCD4-226ENST00000556971 ENGP17813 658 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 GDI1P31150 447 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 SOX9P48436 509 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 CRYBB1P53674 252 aaPredicted RBP13.93□□□□□ -0.18
ABCD4-226ENST00000556971 PPARAQ07869 468 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 TRIM61Q5EBN2 209 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
ABCD4-226ENST00000556971 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 KRT25Q7Z3Z0 450 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 LPPQ93052 612 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 SSX2IPQ9Y2D8 614 aa13.93□□□□□ -0.18
ABCD4-226ENST00000556971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
ABCD4-226ENST00000556971 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 TRABD2BA6NFA1 517 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
ABCD4-226ENST00000556971 KRT10P13645 584 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 FCARP24071 287 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 DGKKQ5KSL6 1271 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 POTEHQ6S545 545 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 FCHSD1Q86WN1 690 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 MAP4K3Q8IVH8 894 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 SEPT1Q8WYJ6 367 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 BCL11AQ9H165 835 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 MBD1Q9UIS9 605 aaPredicted RBP13.92□□□□□ -0.18
ABCD4-226ENST00000556971 FLNCQ14315 2725 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 ADAMTS9Q9P2N4 1935 aa13.92□□□□□ -0.18
ABCD4-226ENST00000556971 FBN3Q75N90 2809 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 ERVH48-1M5A8F1 160 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 NRG2O14511 850 aaPredicted RBP13.91□□□□□ -0.18
ABCD4-226ENST00000556971 C6P13671 934 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 GHRHRQ02643 423 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 TRIP6Q15654 476 aaKnown RBP13.91□□□□□ -0.18
ABCD4-226ENST00000556971 LILRA6Q6PI73 481 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 PIGKQ92643 395 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 HHIPQ96QV1 700 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 PCYT2Q99447 389 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 EVLQ9UI08 416 aaPredicted RBP13.91□□□□□ -0.18
ABCD4-226ENST00000556971 SLC8A2Q9UPR5 921 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
ABCD4-226ENST00000556971 USP9YO00507 2555 aaPredicted RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 GPAA1O43292 621 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 VTNP04004 478 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 SNHG28P0DPA3 235 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 RPL17P18621 184 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 KLRC1P26715 233 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 PPM1LQ5SGD2 360 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 PMS2CLQ68D20 193 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 TXNDC11Q6PKC3 985 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 SENP7Q9BQF6 1050 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 NUSAP1Q9BXS6 441 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 POLR3BQ9NW08 1133 aaPredicted RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 INVSQ9Y283 1065 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 PRG3Q9Y2Y8 225 aaPredicted RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 MRPS23Q9Y3D9 190 aaKnown RBP13.9□□□□□ -0.18
ABCD4-226ENST00000556971 POLQO75417 2590 aa13.9□□□□□ -0.18
ABCD4-226ENST00000556971 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 MEIS3P2A8K0S8 358 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 XYLBO75191 536 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 GPR32O75388 356 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 HNRNPA1P09651 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
ABCD4-226ENST00000556971 CEBPBP17676 345 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 EIF2S3P41091 472 aaKnown RBP13.89□□□□□ -0.19
ABCD4-226ENST00000556971 DSG1Q02413 1049 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 LY6DQ14210 128 aa13.89□□□□□ -0.19
ABCD4-226ENST00000556971 LIN9Q5TKA1 542 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms