RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CA14Q9ULX7 337 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 PPME1Q9Y570 386 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 SNX14Q9Y5W7 946 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 CLUHO75153 1309 aa14.15□□□□□ -0.15
SHMT2-223ENST00000556689 M0R2N6 131 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 EML1O00423 815 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 CDC45O75419 566 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 RFPL2O75678 378 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 C1RP00736 705 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 P4HBP07237 508 aaKnown RBP14.14□□□□□ -0.15
SHMT2-223ENST00000556689 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 RPS6KB1P23443 525 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 RFC5P40937 340 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 GLUD2P49448 558 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 DSG1Q02413 1049 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 NCBP1Q09161 790 aaKnown RBP14.14□□□□□ -0.15
SHMT2-223ENST00000556689 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 RNF149Q8NC42 400 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 SMG8Q8ND04 991 aaKnown RBP14.14□□□□□ -0.15
SHMT2-223ENST00000556689 TCP11Q8WWU5 503 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-223ENST00000556689 COLEC11Q9BWP8 271 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 TBC1D17Q9HA65 648 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 SIT1Q9Y3P8 196 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 R4GN57 208 aa14.14□□□□□ -0.15
SHMT2-223ENST00000556689 ARL5CA6NH57 179 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 ERLIN2O94905 339 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 PAPLNO95428 1278 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 EFEMP2O95967 443 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 DCNP07585 359 aaKnown RBP14.13□□□□□ -0.15
SHMT2-223ENST00000556689 LAMP2P13473 410 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 PSMA5P28066 241 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 AXLP30530 894 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 HSPA4P34932 840 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 EVCP57679 992 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 PPP2R5CQ13362 524 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 SPECC1Q5M775 1068 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 OTUD6AQ7L8S5 288 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 RNF168Q8IYW5 571 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-223ENST00000556689 GPR152Q8TDT2 470 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-223ENST00000556689 RMDN1Q96DB5 314 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 GAD1Q99259 594 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 CHST7Q9NS84 486 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 IPPQ9Y573 584 aa14.13□□□□□ -0.15
SHMT2-223ENST00000556689 SPTBN4Q9H254 2564 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 TGM5O43548 720 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 MLH1P40692 756 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 DSC1Q08554 894 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 PCBP1Q15365 356 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-223ENST00000556689 NOTUMQ6P988 496 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 ZC3H14Q6PJT7 736 aaKnown RBP14.12□□□□□ -0.15
SHMT2-223ENST00000556689 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 C1orf210Q8IVY1 113 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 C4orf19Q8IY42 314 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 GPR65Q8IYL9 337 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 KIAA2013Q8IYS2 634 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 DAGLBQ8NCG7 672 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
SHMT2-223ENST00000556689 PRKD2Q9BZL6 878 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-223ENST00000556689 MIOSQ9NXC5 875 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 ZDHHC7Q9NXF8 308 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 WRAP73Q9P2S5 460 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-223ENST00000556689 VAV3Q9UKW4 847 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
SHMT2-223ENST00000556689 ANHXE9PGG2 379 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 CPLX1O14810 134 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 SLC37A4O43826 429 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 MARCH6O60337 910 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 DEXIO95424 95 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 SP9P0CG40 484 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 YWHABP31946 246 aaKnown RBP14.11□□□□□ -0.15
SHMT2-223ENST00000556689 SCNN1GP51170 649 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 MXD4Q14582 209 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-223ENST00000556689 EPHA7Q15375 998 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 INF2Q27J81 1249 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 USP41Q3LFD5 358 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 LILRA6Q6PI73 481 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 DGLUCYQ7Z3D6 616 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 KRT25Q7Z3Z0 450 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 SKAP1Q86WV1 359 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 FAM177A1Q8N128 213 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-223ENST00000556689 CCDC51Q96ER9 411 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 HINFPQ9BQA5 517 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 CSRNP2Q9H175 543 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 KCNMB3Q9NPA1 279 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 ARHGEF3Q9NR81 526 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 SLC2A4RGQ9NR83 387 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 BMP2KQ9NSY1 1161 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-223ENST00000556689 DLGAP2Q9P1A6 1054 aa14.11□□□□□ -0.15
SHMT2-223ENST00000556689 FNIP2Q9P278 1114 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms