RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	KIFC3	Q9BVG8	833 aa		13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	RUSC1	Q9BVN2	902 aa		13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	NXF3	Q9H4D5	531 aa	Known RBP	13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	CD320	Q9NPF0	282 aa		13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	CLEC1B	Q9P126	229 aa		13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	CNTNAP2	Q9UHC6	1331 aa		13.54	□□□□□ -0.24
RBM23-222	ENST00000556687	ARL5C	A6NH57	179 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	GLP2R	O95838	553 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	SYT1	P21579	422 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	AKAP5	P24588	427 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	GRIN1	Q05586	938 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	DUSP6	Q16828	381 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	FAM187B	Q17R55	369 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	PDE12	Q6L8Q7	609 aa	Known RBP	13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	RINT1	Q6NUQ1	792 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	FAM173B	Q6P4H8	233 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	SLC27A1	Q6PCB7	646 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	C1orf186	Q6ZWK4	172 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	BRAP	Q7Z569	592 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	FAM178B	Q8IXR5	827 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	DAW1	Q8N136	415 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	VN1R2	Q8NFZ6	395 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	DEPTOR	Q8TB45	409 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	IGSF21	Q96ID5	467 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	ZFP42	Q96MM3	310 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	TRIM6	Q9C030	488 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	CCDC113	Q9H0I3	377 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	ENTPD7	Q9NQZ7	604 aa		13.53	□□□□□ -0.24
RBM23-222	ENST00000556687	TDRD15	B5MCY1	1934 aa	Known RBP	13.52	□□□□□ -0.24
RBM23-222	ENST00000556687	MUC3A	Q02505	3323 aa		13.52	□□□□□ -0.24
RBM23-222	ENST00000556687	SFI1	A8K8P3	1242 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687		K7ELQ4	463 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PRKCB	P05771	671 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PDC	P20941	246 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	MLH1	P40692	756 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	NDUFV1	P49821	464 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	SCNN1G	P51170	649 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PPP2R5A	Q15172	486 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	SF3A1	Q15459	793 aa	Known RBP	13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PUS10	Q3MIT2	529 aa	Known RBP	13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	HYI	Q5T013	277 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	EEF1DP3	Q658K8	133 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	AUTS2	Q8WXX7	1259 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	RSPH1	Q8WYR4	309 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	KIFAP3	Q92845	792 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	TMEM169	Q96HH4	297 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	MSLNL	Q96KJ4	702 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	IFT74	Q96LB3	600 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PRIMPOL	Q96LW4	560 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	VN1R3	Q9BXE9	311 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	C2orf40	Q9H1Z8	148 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	PDZD7	Q9H5P4	517 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	NGRN	Q9NPE2	291 aa	Known RBP	13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	UBN1	Q9NPG3	1134 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	KLK14	Q9P0G3	267 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	KANSL3	Q9P2N6	904 aa		13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM23-222	ENST00000556687	C2orf71	A6NGG8	1288 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	ACKR2	O00590	384 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	NRP1	O14786	923 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	INPPL1	O15357	1258 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	MBTPS2	O43462	519 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	HIP1R	O75146	1068 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CXCL14	O95715	111 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	ALDH2	P05091	517 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	SSB	P05455	408 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	PEX3	P56589	373 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	RAD51AP2	Q09MP3	1159 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	REST	Q13127	1097 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	MAPK7	Q13164	816 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	PRPF4B	Q13523	1007 aa	Known RBP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	KCNC3	Q14003	757 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	MAPK6	Q16659	721 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	NT5DC1	Q5TFE4	455 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	DDX53	Q86TM3	631 aa	Known RBP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CABP7	Q86V35	215 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	VPS52	Q8N1B4	723 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	MRPL43	Q8N983	215 aa	Known RBP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	GSTCD	Q8NEC7	633 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	LRRC15	Q8TF66	581 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	INTS4	Q96HW7	963 aa	Known RBP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	FAM193B	Q96PV7	902 aa	Predicted RBP	13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CXCL16	Q9H2A7	254 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	PARP2	Q9UGN5	583 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CD207	Q9UJ71	328 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	FAN1	Q9Y2M0	1017 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	GIT1	Q9Y2X7	761 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CLIC4	Q9Y696	253 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	MYH11	P35749	1972 aa		13.51	□□□□□ -0.25
RBM23-222	ENST00000556687	CCDC169	A6NNP5	214 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687		K7ERI5	159 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	CA8	P35219	290 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	NPTX2	P47972	431 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	SMC1A	Q14683	1233 aa	Known RBP	13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	TMEM132A	Q24JP5	1023 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	TMEM119	Q4V9L6	283 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	LLGL2	Q6P1M3	1020 aa		13.5	□□□□□ -0.25
RBM23-222	ENST00000556687	COLGALT2	Q8IYK4	626 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms