RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ATF7IPQ6VMQ6 1270 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 SGSM3Q96HU1 749 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 ZSWIM3Q96MP5 696 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 SAMD11Q96NU1 681 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 CLIC6Q96NY7 704 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 PSMD1Q99460 953 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-243ENST00000556671 ANKRD2Q9GZV1 360 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 SIL1Q9H173 461 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 BICC1Q9H694 974 aaKnown RBP5.77□□□□□ -1.49
ATXN3-243ENST00000556671 ASH2LQ9UBL3 628 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 POLLQ9UGP5 575 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 WASF3Q9UPY6 502 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 HDAC5Q9UQL6 1122 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 R3HCC1Q9Y3T6 440 aaKnown RBP5.77□□□□□ -1.49
ATXN3-243ENST00000556671 LRRFIP2Q9Y608 721 aaKnown RBP5.77□□□□□ -1.49
ATXN3-243ENST00000556671 COL4A1P02462 1669 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 TRPM7Q96QT4 1865 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 KRIT1O00522 736 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 KLF4O43474 513 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 FRAT2O75474 233 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 CYP7B1O75881 506 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 CSF1RP07333 972 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 GNAI3P08754 354 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 TRIM27P14373 513 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 INSRRP14616 1297 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 MLLT6P55198 1093 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 CHRNDQ07001 517 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 HSP90AA2PQ14568 343 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 TNIP1Q15025 636 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 TMEM57Q8N5G2 664 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 KLHDC4Q8TBB5 520 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 TBC1D16Q8TBP0 767 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 ARHGAP45Q92619 1136 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 MBD6Q96DN6 1003 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 WRNIP1Q96S55 665 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 TMEM209Q96SK2 561 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 GPR20Q99678 358 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 PHF20Q9BVI0 1012 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 PLA2G12BQ9BX93 195 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 PUS3Q9BZE2 481 aaKnown RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 SLC6A20Q9NP91 592 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 PPARGC1AQ9UBK2 798 aaKnown RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 MYO5AQ9Y4I1 1855 aaKnown RBP5.76□□□□□ -1.49
ATXN3-243ENST00000556671 PSME4Q14997 1843 aa5.76□□□□□ -1.49
ATXN3-243ENST00000556671 XDHP47989 1333 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 RIC1Q4ADV7 1423 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 LRRC37AA6NMS7 1700 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 SNAP23O00161 211 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 ECE2O60344 883 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 B4GALT3O60512 393 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 GNAI2P04899 355 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 CXCL9Q07325 125 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-243ENST00000556671 LRRC24Q50LG9 513 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 METTL24Q5JXM2 366 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 USP53Q70EK8 1073 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 PIP4K2CQ8TBX8 421 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 ZCCHC14Q8WYQ9 949 aaKnown RBP5.75□□□□□ -1.49
ATXN3-243ENST00000556671 MEIS3Q99687 375 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 AARSD1Q9BTE6 412 aaKnown RBP5.75□□□□□ -1.49
ATXN3-243ENST00000556671 JAM3Q9BX67 310 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 C1QTNF3Q9BXJ4 246 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 L2HGDHQ9H9P8 463 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 MYH2Q9UKX2 1941 aa5.75□□□□□ -1.49
ATXN3-243ENST00000556671 ZNF804BA4D1E1 1349 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 GOLGB1Q14789 3259 aaKnown RBP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 H7C1D1 291 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 FZD9O00144 591 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 CYP1A1P04798 512 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 FGFR1P11362 822 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 C1QTNF8P60827 252 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 G3BP1Q13283 466 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 PUM1Q14671 1186 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 SURF1Q15526 300 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 CPZQ66K79 652 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 PKN3Q6P5Z2 889 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 PLEKHH3Q7Z736 793 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 PROSER1Q86XN7 944 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 TRIM48Q8IWZ4 208 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 GPC2Q8N158 579 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 DCAF4Q8WV16 495 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 KAZALD1Q96I82 304 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 LOXL4Q96JB6 756 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 NEUROD6Q96NK8 337 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 TMEM168Q9H0V1 697 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 VPS33BQ9H267 617 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 ARHGEF4Q9NR80 690 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 CNOT7Q9UIV1 285 aaKnown RBP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 HACL1Q9UJ83 578 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 CROTQ9UKG9 612 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 PA2G4Q9UQ80 394 aaKnown RBP5.74□□□□□ -1.49
ATXN3-243ENST00000556671 WDR90Q96KV7 1748 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 ZNF536O15090 1300 aa5.74□□□□□ -1.49
ATXN3-243ENST00000556671 IQCA1LA6NCM1 817 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms