RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CDCA3Q99618 268 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 EIF2AK1Q9BQI3 630 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 LLPHQ9BRT6 129 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 DHX33Q9H6R0 707 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CWH43Q9H720 699 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 TLE6Q9H808 572 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 TTC12Q9H892 705 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 ENTPD7Q9NQZ7 604 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 RGL1Q9NZL6 768 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 GMPR2Q9P2T1 348 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 PRKAG3Q9UGI9 489 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CD207Q9UJ71 328 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 LZTS1Q9Y250 596 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 TTC24A2A3L6 582 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 MBTPS2O43462 519 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 ERLIN2O94905 339 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 ATP2B1P20020 1258 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 CA8P35219 290 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 GTF2F1P35269 517 aaKnown RBP eCLIP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 IRS1P35568 1242 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 TXKP42681 527 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 PHKA2P46019 1235 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 ALDH7A1P49419 539 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 HMGN5P82970 282 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 RNASELQ05823 741 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 CAMK1Q14012 370 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 PLPP4Q5VZY2 271 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 GLB1LQ6UWU2 654 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 TMC7Q7Z402 723 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 KSR1Q8IVT5 923 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 EFHBQ8N7U6 833 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 NGRNQ9NPE2 291 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 SH2B1Q9NRF2 756 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 ANKEF1Q9NU02 776 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
HNRNPC-226ENST00000556628 CUL9Q8IWT3 2517 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 LINC01565O15544 149 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 WFS1O76024 890 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 SLITRK3O94933 977 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 LYPLA2O95372 231 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 ALADP13716 330 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 AXLP30530 894 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 MCM7P33993 719 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 LTBRP36941 435 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 ERVFC1P60507 584 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 GUCY1B3Q02153 619 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 SPIRE1Q08AE8 756 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 LAMTOR4Q0VGL1 99 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TFDP1Q14186 410 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 MXD4Q14582 209 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 EMC2Q15006 297 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 PCBP1Q15365 356 aaKnown RBP eCLIP8.56□□□□□ -1.043e-6■■■□□ 15.1
HNRNPC-226ENST00000556628 QPCTQ16769 361 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TMEM31Q5JXX7 168 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 ADGRD2Q7Z7M1 963 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 ADHFE1Q8IWW8 467 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 CNNM3Q8NE01 707 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 ERMNQ8TAM6 284 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 URGCPQ8TCY9 931 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TMEM143Q96AN5 459 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TMEM169Q96HH4 297 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TCF25Q9BQ70 676 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 BACH2Q9BYV9 841 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 UPF2Q9HAU5 1272 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 PRDM9Q9NQV7 894 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 FAM105AQ9NUU6 356 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 WRAP73Q9P2S5 460 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 NOL7Q9UMY1 257 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 INPP5FQ9Y2H2 1132 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
HNRNPC-226ENST00000556628 PI4K2BG5E9Z4 385 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 PER2O15055 1255 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 ZNF623O75123 536 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 ZC3H11AO75152 810 aaKnown RBP eCLIP8.55□□□□□ -1.045e-13■■□□□ 12.3
HNRNPC-226ENST00000556628 TBX10O75333 385 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.043e-6■□□□□ 10.7
HNRNPC-226ENST00000556628 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 BCAR1P56945 870 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 ORC2Q13416 577 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 SMC1AQ14683 1233 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 SMAD2Q15796 467 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 DUSP6Q16828 381 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 LONRF3Q496Y0 759 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms