RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CNGA4Q8IV77 575 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 GPD1LQ8N335 351 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
LINC01550-206ENST00000556462 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
LINC01550-206ENST00000556462 MRPL4Q9BYD3 311 aaKnown RBP11.81□□□□□ -0.52
LINC01550-206ENST00000556462 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 FAM207AQ9NSI2 230 aaPredicted RBP11.81□□□□□ -0.52
LINC01550-206ENST00000556462 HDAC6Q9UBN7 1215 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 KAT6AQ92794 2004 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 SIP14410 1827 aa11.81□□□□□ -0.52
LINC01550-206ENST00000556462 SMIM35A0A1B0GVV1 85 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 A0A1W2PQJ5 194 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 ABLIM1O14639 778 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 TREHO43280 583 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 NOL4O94818 638 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 MSNP26038 577 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 GPC3P51654 580 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 ZNF200P98182 395 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CRELD2Q6UXH1 353 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PARD3BQ8TEW8 1205 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 ABHD10Q9NUJ1 306 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 AGO2Q9UKV8 859 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 LUC7L2Q9Y383 392 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 KIAA0391O15091 583 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 EXTL3O43909 919 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 STX10O60499 249 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CSDE1O75534 798 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 TOM1L1O75674 476 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 TPM1P09493 284 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 KRT13P13646 458 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 SLC9A1P19634 815 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 FECHP22830 423 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PON1P27169 355 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PHKA2P46019 1235 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 FMO5P49326 533 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 APBA1Q02410 837 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PPP3CAQ08209 521 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 ARHGEF6Q15052 776 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 AMHR2Q16671 573 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 FAM187BQ17R55 369 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 EXOC3L4Q17RC7 722 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CCDC112Q8NEF3 446 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 FAM213AQ9BRX8 229 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 ADAMTS10Q9H324 1103 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 PTPRHQ9HD43 1115 aa11.8□□□□□ -0.52
LINC01550-206ENST00000556462 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
LINC01550-206ENST00000556462 CLDN3O15551 220 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 B4GALT5O43286 388 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 FAM189A1O60320 539 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 GPR32O75388 356 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ASGR1P07306 291 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 CYP2C9P11712 490 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 PROZP22891 400 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-206ENST00000556462 PRMT2P55345 433 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZBED6P86452 979 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 KCNA10Q16322 511 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZNF410Q86VK4 478 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-206ENST00000556462 C7orf31Q8N865 590 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 OR8K1Q8NGG5 319 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 KIAA1586Q9HCI6 787 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ANKFY1Q9P2R3 1169 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 C17orf102A2RUQ5 167 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZNF500O60304 480 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZEB2O60315 1214 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 LDHAP00338 332 aaKnown RBP11.79□□□□□ -0.52
LINC01550-206ENST00000556462 INHAP05111 366 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 GRK4P32298 578 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ACOT2P49753 483 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 MCL1Q07820 350 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
LINC01550-206ENST00000556462 KIZQ2M2Z5 673 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
LINC01550-206ENST00000556462 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms