RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ARHGAP28Q9P2N2 729 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 STK17AQ9UEE5 414 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 FGF18O76093 207 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
ACTN1-217ENST00000556203 TIGD5Q53EQ6 642 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 NT5DC1Q5TFE4 455 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 KCNT2Q6UVM3 1135 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 HACE1Q8IYU2 909 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 URGCPQ8TCY9 931 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 POF1BQ8WVV4 589 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 SPIRE2Q8WWL2 714 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 ZNF558Q96NG5 402 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 ZDHHC9Q9Y397 364 aa16.73■□□□□ 0.27
ACTN1-217ENST00000556203 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
ACTN1-217ENST00000556203 RALGAPA2Q2PPJ7 1873 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 A0A087X0B3 334 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 FAM13AO94988 1023 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 DNAJB1P25685 340 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 MLH1P40692 756 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 AFF1P51825 1210 aaKnown RBP16.72■□□□□ 0.27
ACTN1-217ENST00000556203 SMTNP53814 917 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
ACTN1-217ENST00000556203 CAMK1Q14012 370 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 GIT2Q14161 759 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 ATF7IP2Q5U623 682 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 GAD1Q99259 594 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 ADPGKQ9BRR6 497 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
ACTN1-217ENST00000556203 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 NSUN3Q9H649 340 aaKnown RBP16.72■□□□□ 0.27
ACTN1-217ENST00000556203 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
ACTN1-217ENST00000556203 KCNG1Q9UIX4 513 aa16.72■□□□□ 0.27
ACTN1-217ENST00000556203 FNDC1Q4ZHG4 1894 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-217ENST00000556203 CUTAO60888 179 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 ZC3H11AO75152 810 aaKnown RBP eCLIP16.71■□□□□ 0.27
ACTN1-217ENST00000556203 TBCAO75347 108 aaKnown RBP16.71■□□□□ 0.27
ACTN1-217ENST00000556203 POMCP01189 267 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 AKAP5P24588 427 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 PPM1AP35813 382 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 STAT6P42226 847 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 BCAR1P56945 870 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 TCEAL5Q5H9L2 206 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 MYCT1Q8N699 235 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 PDILTQ8N807 584 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 MRPL4Q9BYD3 311 aaKnown RBP16.71■□□□□ 0.27
ACTN1-217ENST00000556203 GBP3Q9H0R5 595 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 ZHX3Q9H4I2 956 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 NRDE2Q9H7Z3 1164 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 PARVGQ9HBI0 331 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 PARP2Q9UGN5 583 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
ACTN1-217ENST00000556203 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
ACTN1-217ENST00000556203 NLRC5Q86WI3 1866 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ARL5CA6NH57 179 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 NT5C1B-RDH14C9J2C7 533 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 MAPTP10636 758 aaKnown RBP16.7■□□□□ 0.26
ACTN1-217ENST00000556203 IRS1P35568 1242 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ME1P48163 572 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ALDH7A1P49419 539 aaKnown RBP16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ZNF131P52739 623 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 UBE3AQ05086 875 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 STRN3Q13033 797 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-217ENST00000556203 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 SV2BQ7L1I2 683 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ZNF280BQ86YH2 543 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 CHAMP1Q96JM3 812 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-217ENST00000556203 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
ACTN1-217ENST00000556203 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 KLK14Q9P0G3 267 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 THEGQ9P2T0 379 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
ACTN1-217ENST00000556203 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 H0YCG3 227 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 INPPL1O15357 1258 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 B4GALT3O60512 393 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 DDHD2O94830 711 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 GALTP07902 379 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 SCNN1GP51170 649 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 NCKAP1LP55160 1127 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 KRT17Q04695 432 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms