RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MAP3K20Q9NYL2 800 aaKnown RBP17.43■□□□□ 0.38
TUBB3-209ENST00000555609 UVRAGQ9P2Y5 699 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 DDX20Q9UHI6 824 aaKnown RBP17.43■□□□□ 0.38
TUBB3-209ENST00000555609 NR2E1Q9Y466 385 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 RPTORQ8N122 1335 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 ZBTB7AO95365 584 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 AGTP01019 485 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 PEX5P50542 639 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 GHRHRQ02643 423 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 IFT88Q13099 833 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 LACTB2Q53H82 288 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-209ENST00000555609 ERMARDQ5T6L9 678 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 RNF187Q5TA31 235 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-209ENST00000555609 GKAP1Q5VSY0 366 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-209ENST00000555609 CCDC174Q6PII3 467 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
TUBB3-209ENST00000555609 TATDN2Q93075 761 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 SEC16BQ96JE7 1060 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 CNOT8Q9UFF9 292 aaKnown RBP17.42■□□□□ 0.38
TUBB3-209ENST00000555609 EXOC7Q9UPT5 735 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
TUBB3-209ENST00000555609 H0YIN7 160 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 CYP1A2P05177 515 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 GHRP10912 638 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 TAL1P17542 331 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 MFAP3P55082 362 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ZDHHC24Q6UX98 284 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 C12orf50Q8NA57 414 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 CD101Q93033 1021 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 CNKSR1Q969H4 720 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 PRMT6Q96LA8 375 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 PLVAPQ9BX97 442 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ZBTB21Q9ULJ3 1066 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 MMP10P09238 476 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ECE1P42892 770 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 LDHDQ86WU2 507 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 MCF2L2Q86YR7 1114 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 PRELID2Q8N945 189 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 FAM81BQ96LP2 452 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ROPN1BQ9BZX4 212 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 EPB41L4BQ9H329 900 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ROPN1Q9HAT0 212 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
TUBB3-209ENST00000555609 HSPBP1Q9NZL4 362 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 PCDHA3Q9Y5H8 950 aa17.41■□□□□ 0.38
TUBB3-209ENST00000555609 LRRN2O75325 713 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 RARGP13631 454 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 GTF2H1P32780 548 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 MMP13P45452 471 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 QARSP47897 775 aaKnown RBP17.4■□□□□ 0.38
TUBB3-209ENST00000555609 MXI1P50539 228 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 ARHGEF19Q8IW93 802 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 SLC20A1Q8WUM9 679 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 MAIP1Q8WWC4 291 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 SLCO2A1Q92959 643 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 CHMP6Q96FZ7 201 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 TRIM31Q9BZY9 425 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 KDM4CQ9H3R0 1056 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 TBC1D22BQ9NU19 505 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 GRHL1Q9NZI5 618 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 GTF3C4Q9UKN8 822 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 SNX24Q9Y343 169 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 COQ4Q9Y3A0 265 aa17.4■□□□□ 0.38
TUBB3-209ENST00000555609 DRD4P21917 467 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 COMTP21964 271 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 TMOD1P28289 359 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 RARRES1P49788 294 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 PLTPP55058 493 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 ZNF211Q13398 564 aaPredicted RBP17.39■□□□□ 0.38
TUBB3-209ENST00000555609 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 C1orf220Q5T0J3 134 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 SYDE1Q6ZW31 735 aaPredicted RBP17.39■□□□□ 0.38
TUBB3-209ENST00000555609 CPLX4Q7Z7G2 160 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 USP37Q86T82 979 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 PALB2Q86YC2 1186 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 RDH13Q8NBN7 331 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 SHC3Q92529 594 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 GLG1Q92896 1179 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 YY1AP1Q9H869 796 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 NOCTQ9UK39 431 aaKnown RBP17.39■□□□□ 0.38
TUBB3-209ENST00000555609 PNMA2Q9UL42 364 aa17.39■□□□□ 0.38
TUBB3-209ENST00000555609 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 PASKQ96RG2 1323 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 VGLL3A8MV65 326 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 ASAP2O43150 1006 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 CAND2O75155 1236 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 ICAM1P05362 532 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 CHRNB2P17787 502 aa17.39■□□□□ 0.37
TUBB3-209ENST00000555609 COILP38432 576 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-209ENST00000555609 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms