RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KIAA1024Q9UPX6 916 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 DNM3Q9UQ16 869 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 MYO7AQ13402 2215 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 ACKR2O00590 384 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 BMP15O95972 392 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 CTSAP10619 480 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 ALADP13716 330 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 PBX3P40426 434 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 DSC1Q08554 894 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 ECM1Q16610 540 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 MAPK6Q16659 721 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 HYIQ5T013 277 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
VRK1-204ENST00000555351 BRAPQ7Z569 592 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 AK8Q96MA6 479 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
VRK1-204ENST00000555351 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
VRK1-204ENST00000555351 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 BHMT2Q9H2M3 363 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
VRK1-204ENST00000555351 KCNG1Q9UIX4 513 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 PCDHGC5Q9Y5F6 944 aa13.09□□□□□ -0.31
VRK1-204ENST00000555351 A0A087WWV3 80 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 ARL5CA6NH57 179 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 N4BP3O15049 544 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 PER2O15055 1255 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 NR1I2O75469 434 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 DDHD2O94830 711 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 CXCL14O95715 111 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 PDCP20941 246 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
VRK1-204ENST00000555351 SLC11A1P49279 550 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 IL17AQ16552 155 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 LONRF3Q496Y0 759 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
VRK1-204ENST00000555351 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 ZNF280BQ86YH2 543 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 VN1R2Q8NFZ6 395 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 SUSD6Q92537 303 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 CASP10Q92851 521 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 SSX2IPQ9Y2D8 614 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
VRK1-204ENST00000555351 NT5C1B-RDH14C9J2C7 533 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 NRP1O14786 923 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 B4GALT5O43286 388 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 GPR37L1O60883 481 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 CSPG5O95196 566 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 EFEMP2O95967 443 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 C1RP00736 705 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 GRIK3Q13003 919 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 ANKRD54Q6NXT1 300 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 MAEAQ7L5Y9 396 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 COLGALT2Q8IYK4 626 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
VRK1-204ENST00000555351 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 USP15Q9Y4E8 981 aaPredicted RBP13.07□□□□□ -0.32
VRK1-204ENST00000555351 B4GALT3O60512 393 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
VRK1-204ENST00000555351 POMCP01189 267 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 PRKCBP05771 671 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 SCP2P22307 547 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 MLH1P40692 756 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
VRK1-204ENST00000555351 ITIH3Q06033 890 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 CBX2Q14781 532 aaPredicted RBP13.06□□□□□ -0.32
VRK1-204ENST00000555351 CLUL1Q15846 466 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 RNF168Q8IYW5 571 aaPredicted RBP13.06□□□□□ -0.32
VRK1-204ENST00000555351 GSTCDQ8NEC7 633 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
VRK1-204ENST00000555351 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
VRK1-204ENST00000555351 INTS4Q96HW7 963 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms