RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, human

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC1-208	ENST00000555240	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	TAS1R1	Q7RTX1	841 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	RAX2	Q96IS3	184 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	PLEKHG4B	Q96PX9	1271 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	GPR87	Q9BY21	358 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	SLC52A1	Q9NWF4	448 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	TMPRSS11E	Q9UL52	423 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	WASHC2C	Q9Y4E1	1318 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240	CDY2A	Q9Y6F7	541 aa		4.08	□□□□□ -1.76
CASC1-208	ENST00000555240		A0A1W2PR48	441 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	FZD7	O75084	574 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	S100B	P04271	92 aa	Predicted RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	LTA4H	P09960	611 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	GYPE	P15421	78 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	ENPP1	P22413	925 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	GDF5	P43026	501 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	MAN2A2	P49641	1150 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	WNT3A	P56704	352 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	CDK17	Q00537	523 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	EXOSC10	Q01780	885 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PTH1R	Q03431	593 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	RRP1B	Q14684	758 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	UBE3C	Q15386	1083 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	FAM214A	Q32MH5	1076 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	LHFPL2	Q6ZUX7	228 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	SPATS2	Q86XZ4	545 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	LYSMD2	Q8IV50	215 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	MSL3	Q8N5Y2	521 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	TGFBRAP1	Q8WUH2	860 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	ST8SIA2	Q92186	375 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PGBD4	Q96DM1	585 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	AHCYL2	Q96HN2	611 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PAWR	Q96IZ0	340 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	QRSL1	Q9H0R6	528 aa	Known RBP	4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PRDM12	Q9H4Q4	367 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PARPBP	Q9NWS1	579 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	DPP7	Q9UHL4	492 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	ZBTB21	Q9ULJ3	1066 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	HDAC5	Q9UQL6	1122 aa		4.07	□□□□□ -1.76
CASC1-208	ENST00000555240	PHLDB1	Q86UU1	1377 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	KRTAP23-1	A1A580	65 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	GOLGA6L6	A8MZA4	724 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	GPR39	O43194	453 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	STC2	O76061	302 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	MTHFD2	P13995	350 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	CCT2	P78371	535 aa	Known RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	MEF2A	Q02078	507 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	ODR4	Q5SWX8	454 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	RNF219	Q5W0B1	726 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	CRIP3	Q6Q6R5	217 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240		Q6ZRM9	215 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	SLC41A1	Q8IVJ1	513 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	CMIP	Q8IY22	773 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	IL17D	Q8TAD2	202 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	AUTS2	Q8WXX7	1259 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	JDP2	Q8WYK2	163 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	ZNF503	Q96F45	646 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	IL17RA	Q96F46	866 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	CDC5L	Q99459	802 aa	Known RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	VTA1	Q9NP79	307 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	C14orf119	Q9NWQ9	140 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	HECA	Q9UBI9	543 aa	Predicted RBP	4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	SRRD	Q9UH36	339 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	MCM8	Q9UJA3	840 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	HS3ST3A1	Q9Y663	406 aa		4.06	□□□□□ -1.76
CASC1-208	ENST00000555240	WASHC2A	Q641Q2	1341 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	NPIPB8	E9PQR5	432 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	PLSCR1	O15162	318 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	HOXA3	O43365	443 aa	Predicted RBP	4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	C1S	P09871	688 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	HK1	P19367	917 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	GZMK	P49863	264 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	SCNN1G	P51170	649 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	MRPS9	P82933	396 aa	Known RBP	4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	DGCR2	P98153	550 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	FAM50A	Q14320	339 aa	Known RBP	4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	LSM12	Q3MHD2	195 aa	Known RBP	4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	MIIP	Q5JXC2	388 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	FAM180A	Q6UWF9	173 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	ABHD15	Q6UXT9	468 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	FAM83A	Q86UY5	434 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	TICAM2	Q86XR7	235 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	TMPRSS6	Q8IU80	811 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	FMNL3	Q8IVF7	1028 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	SLC16A11	Q8NCK7	471 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	MDGA1	Q8NFP4	955 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	SNX33	Q8WV41	574 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	LMBR1	Q8WVP7	490 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	FAM193B	Q96PV7	902 aa	Predicted RBP	4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	PSMD1	Q99460	953 aa		4.05	□□□□□ -1.76
CASC1-208	ENST00000555240	RPTOR	Q8N122	1335 aa		4.04	□□□□□ -1.76
CASC1-208	ENST00000555240	PRR5-ARHGAP8	B1AHC4	643 aa		4.04	□□□□□ -1.76
CASC1-208	ENST00000555240	ALG1L2	C9J202	215 aa		4.04	□□□□□ -1.76
CASC1-208	ENST00000555240	AKR1B10	O60218	316 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms