RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 RWDD3Q9Y3V2 267 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 FAM186AA6NE01 2351 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 MYO15AQ9UKN7 3530 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 A0A1B0GUA9 196 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 N4BP3O15049 544 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 TRAK2O60296 914 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 MAPTP10636 758 aaKnown RBP11.66□□□□□ -0.54
TMEM260-206ENST00000555046 FGFR4P22455 802 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 HOXA11P31270 313 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-206ENST00000555046 SYKP43405 635 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 ZNF131P52739 623 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 DEFB103AP81534 67 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 HTRA4P83105 476 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-206ENST00000555046 MBTD1Q05BQ5 628 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 STXBP4Q6ZWJ1 553 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 ECHDC2Q86YB7 292 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 FAM178BQ8IXR5 827 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 KCNN1Q92952 543 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
TMEM260-206ENST00000555046 KCNH6Q9H252 994 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 KBTBD4Q9NVX7 518 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 KANSL3Q9P2N6 904 aa11.66□□□□□ -0.54
TMEM260-206ENST00000555046 GRXCR1A8MXD5 290 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 TSPAN1O60635 241 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 DGKIO75912 1065 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 PRKCBP05771 671 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 IGFBP4P22692 258 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 RABGGTBP53611 331 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 ALCAMQ13740 583 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 NAALADL2Q58DX5 795 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-206ENST00000555046 PPP2R2DQ66LE6 453 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 SLC27A1Q6PCB7 646 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 CMTR2Q8IYT2 770 aaKnown RBP11.65□□□□□ -0.54
TMEM260-206ENST00000555046 DAW1Q8N136 415 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 FIBCD1Q8N539 461 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
TMEM260-206ENST00000555046 MINDY3Q9H8M7 445 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 FAM105AQ9NUU6 356 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 HOOK1Q9UJC3 728 aaKnown RBP11.65□□□□□ -0.54
TMEM260-206ENST00000555046 PCDHB2Q9Y5E7 798 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
TMEM260-206ENST00000555046 TRIP12Q14669 1992 aaPredicted RBP11.65□□□□□ -0.55
TMEM260-206ENST00000555046 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 MYMKA6NI61 221 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 SLC16A4O15374 487 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 MGEA5O60502 916 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 IDEP14735 1019 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 ARF4P18085 180 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 LIG1P18858 919 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 MAPK7Q13164 816 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 BTG3Q14201 252 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 E2F4Q16254 413 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 KYAT1Q16773 422 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 GLB1LQ6UWU2 654 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 DYMQ7RTS9 669 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 HAUS6Q7Z4H7 955 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 TMEM161BQ8NDZ6 487 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 BSNDQ8WZ55 320 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 CCDC47Q96A33 483 aaKnown RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 TGS1Q96RS0 853 aaKnown RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 MRPL9Q9BYD2 267 aaKnown RBP11.64□□□□□ -0.55
TMEM260-206ENST00000555046 TMEM117Q9H0C3 514 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 ST6GALNAC4Q9H4F1 302 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 POLD4Q9HCU8 107 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 EXOC7Q9UPT5 735 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 ACACBO00763 2458 aa11.64□□□□□ -0.55
TMEM260-206ENST00000555046 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 A0A087X0B3 334 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 NPHP3-ACAD11A0A0J9YXS1 232 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 RB1P06400 928 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 CA3P07451 260 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 ITGA4P13612 1032 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 PFKFB1P16118 471 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 PBX2P40425 430 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms