RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RIN1Q13671 783 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ADGRE4PQ86SQ3 457 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ANKRD53Q8N9V6 530 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CALML6Q8TD86 181 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CACTINQ8WUQ7 758 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 RTF1Q92541 710 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 E2F7Q96AV8 911 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 AHCYL2Q96HN2 611 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 PLEKHG4BQ96PX9 1271 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ASPSCR1Q9BZE9 553 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CCDC8Q9H0W5 538 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 METTL14Q9HCE5 456 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 VTA1Q9NP79 307 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 DENND2AQ9ULE3 1009 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 RBM8AQ9Y5S9 174 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 SUPT6HQ7KZ85 1726 aaKnown RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 A0A0A6YYK5 440 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 UBA6A0AVT1 1052 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 K7ESF4 209 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 MAFO75444 373 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 ALDH1L1O75891 902 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 HNRNPLP14866 589 aaKnown RBP eCLIP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 MCM7P33993 719 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 RPS19P39019 145 aaKnown RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 PTTG1IPP53801 180 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 WRNQ14191 1432 aaPredicted RBP eCLIP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 TTC38Q5R3I4 469 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 SYDE2Q5VT97 1194 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 SLFN12LQ6IEE8 588 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 CD109Q6YHK3 1445 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 SGMS1Q86VZ5 419 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 PHYKPLQ8IUZ5 450 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 OR5AN1Q8NGI8 311 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 WDR48Q8TAF3 677 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF496Q96IT1 587 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 MAML3Q96JK9 1138 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 TUBGCP5Q96RT8 1024 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 SOX7Q9BT81 388 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 CSRNP2Q9H175 543 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 MS4A5Q9H3V2 200 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 POFUT1Q9H488 388 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 TOPORSQ9NS56 1045 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 C14orf119Q9NWQ9 140 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 CEP72Q9P209 647 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 USP36Q9P275 1121 aaKnown RBP2.04□□□□□ -2.08
PRPF39-208ENST00000554785 DNAI1Q9UI46 699 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 KCNG1Q9UIX4 513 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 MSRAQ9UJ68 235 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 TRHDEQ9UKU6 1024 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 PLB1Q6P1J6 1458 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 WASHC2AQ641Q2 1341 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 PREX1Q8TCU6 1659 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 ERICH3Q5RHP9 1530 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 GLI2P10070 1586 aa2.04□□□□□ -2.08
PRPF39-208ENST00000554785 GOLGA8AA7E2F4 631 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 GOLGA8BA8MQT2 603 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 GABRDO14764 452 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 KDM1AO60341 852 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 STC2O76061 302 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ACRV1P26436 265 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 INHBCP55103 352 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SCAND1P57086 179 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ERVK-21P61565 698 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SLC25A3Q00325 362 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 PTH1RQ03431 593 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 KLF1Q13351 362 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 TCIRG1Q13488 830 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 FHL2Q14192 279 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 RRP1BQ14684 758 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 LSM12Q3MHD2 195 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ODR4Q5SWX8 454 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 PRAMEF9Q5VWM5 478 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 TIGD7Q6NT04 549 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 Q6ZRM9 215 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ESPNLQ6ZVH7 1005 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 GAREM2Q75VX8 874 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 CLEC14AQ86T13 490 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 D2HGDHQ8N465 521 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 C7orf31Q8N865 590 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 RABGGTAQ92696 567 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SMAD5Q99717 465 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 HAPLN2Q9GZV7 340 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 MSL2Q9HCI7 577 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SLC2A4RGQ9NR83 387 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 KLHL42Q9P2K6 505 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SAE1Q9UBE0 346 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 G3BP2Q9UN86 482 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 VWA7Q9Y334 891 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SPEF1Q9Y4P9 236 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 BIVM-ERCC5R4GMW8 1640 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 WDR7Q9Y4E6 1490 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF335Q9H4Z2 1342 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 IQGAP2Q13576 1575 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 A0A1W2PRX2 142 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 UBE2QL1A1L167 161 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ELL2O00472 640 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 TOX4O94842 621 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 PRPF6O94906 941 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF202O95125 648 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 APOL3O95236 402 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms