RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MCM5P33992 734 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 CNR2P34972 360 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 PHKA2P46019 1235 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 FNTBP49356 437 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 NOVA1P51513 510 aaKnown RBP19.03■□□□□ 0.64
NEK9-204ENST00000554258 CLCN3P51790 818 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 CCDC6Q16204 474 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 CEP68Q76N32 757 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 PALB2Q86YC2 1186 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 ZNF280BQ86YH2 543 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 FBXL16Q8N461 479 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 IGDCC4Q8TDY8 1250 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 JAKMIP1Q96N16 626 aaKnown RBP19.03■□□□□ 0.64
NEK9-204ENST00000554258 MAP7D2Q96T17 732 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 ADAMTS10Q9H324 1103 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 GAS2O43903 313 aaKnown RBP19.02■□□□□ 0.64
NEK9-204ENST00000554258 ZNF252P-AS1Q0IIN9 211 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 GRM4Q14833 912 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 SEC23AQ15436 765 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 PDXDC2PQ6P474 469 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 FGF13Q92913 245 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
NEK9-204ENST00000554258 SCLT1Q96NL6 688 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 HERC2P3Q9BVR0 1158 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 HEBP1Q9NRV9 189 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 WASF3Q9UPY6 502 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 FAN1Q9Y2M0 1017 aa19.02■□□□□ 0.64
NEK9-204ENST00000554258 IGKV6D-21A0A0A0MT36 114 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 ATG7O95352 703 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 ALDH2P05091 517 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 ZNF806P0C7X5 589 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 RPS6KB1P23443 525 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 CXCL12P48061 93 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 GLUD2P49448 558 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 BLOC1S2Q6QNY1 142 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 RUFY3Q7L099 469 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 GRASPQ7Z6J2 395 aaPredicted RBP19.01■□□□□ 0.63
NEK9-204ENST00000554258 CKAP2LQ8IYA6 745 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 TMEM87BQ96K49 555 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 ARRDC1-AS1Q9H2J1 176 aa19.01■□□□□ 0.63
NEK9-204ENST00000554258 AXIN1O15169 862 aa19■□□□□ 0.63
NEK9-204ENST00000554258 TGM5O43548 720 aa19■□□□□ 0.63
NEK9-204ENST00000554258 PRC1O43663 620 aa19■□□□□ 0.63
NEK9-204ENST00000554258 OFD1O75665 1012 aa19■□□□□ 0.63
NEK9-204ENST00000554258 DARSP14868 501 aaKnown RBP19■□□□□ 0.63
NEK9-204ENST00000554258 SATB1Q01826 763 aa19■□□□□ 0.63
NEK9-204ENST00000554258 TWF2Q6IBS0 349 aaKnown RBP19■□□□□ 0.63
NEK9-204ENST00000554258 ZNF710Q8N1W2 664 aa19■□□□□ 0.63
NEK9-204ENST00000554258 URGCPQ8TCY9 931 aa19■□□□□ 0.63
NEK9-204ENST00000554258 FAM193BQ96PV7 902 aaPredicted RBP19■□□□□ 0.63
NEK9-204ENST00000554258 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
NEK9-204ENST00000554258 RXFP1Q9HBX9 757 aa19■□□□□ 0.63
NEK9-204ENST00000554258 ZNF302Q9NR11 478 aa19■□□□□ 0.63
NEK9-204ENST00000554258 ANKFY1Q9P2R3 1169 aa19■□□□□ 0.63
NEK9-204ENST00000554258 MEIS3P2A8K0S8 358 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 GIPC1O14908 333 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 TOP3BO95985 862 aaKnown RBP18.99■□□□□ 0.63
NEK9-204ENST00000554258 SKIP12755 728 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 NTHL1P78549 312 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 TAS1R1Q7RTX1 841 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 TRMT1LQ7Z2T5 733 aaKnown RBP18.99■□□□□ 0.63
NEK9-204ENST00000554258 CCDC60Q8IWA6 550 aaPredicted RBP18.99■□□□□ 0.63
NEK9-204ENST00000554258 TMEM175Q9BSA9 504 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 SCNM1Q9BWG6 230 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 CHST12Q9NRB3 414 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
NEK9-204ENST00000554258 UNC79Q9P2D8 2635 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 SPDYE3A6NKU9 549 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 SHISA7A6NL88 538 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 MAN2B1O00754 1011 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 SH2B2O14492 632 aaPredicted RBP18.98■□□□□ 0.63
NEK9-204ENST00000554258 NRP1O14786 923 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 IFIT3O14879 490 aaKnown RBP18.98■□□□□ 0.63
NEK9-204ENST00000554258 ZMYND10O75800 440 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 DDHD2O94830 711 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 C1RP00736 705 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 CPA1P15085 419 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 TMOD1P28289 359 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 LIFRP42702 1097 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 HEATR6Q6AI08 1181 aaKnown RBP18.98■□□□□ 0.63
NEK9-204ENST00000554258 EFCAB12Q6NXP0 572 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 ABHD15Q6UXT9 468 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 LONP2Q86WA8 852 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 GLYCTKQ8IVS8 523 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 ZNF687Q8N1G0 1237 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 MXRA8Q9BRK3 442 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 LMAN1LQ9HAT1 526 aa18.98■□□□□ 0.63
NEK9-204ENST00000554258 DDX39AO00148 427 aaKnown RBP18.97■□□□□ 0.63
NEK9-204ENST00000554258 MAGEB2O15479 319 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 KIF5BP33176 963 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 GPC3P51654 580 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 ITGB3BPQ13352 177 aaPredicted RBP18.97■□□□□ 0.63
NEK9-204ENST00000554258 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
NEK9-204ENST00000554258 RNF43Q68DV7 783 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 SGMS1Q86VZ5 419 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 LRRC71Q8N4P6 559 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 TRAIPQ9BWF2 469 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 PSTPIP2Q9H939 334 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms