RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 EML1O00423 815 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
TDP1-208ENST00000553989 ZNF623O75123 536 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 CDKL5O76039 1030 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 STBD1O95210 358 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 ALDH2P05091 517 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 XBP1P17861 261 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 CYP3A7P24462 503 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 RFC5P40937 340 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 AK2P54819 239 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 TOB2Q14106 344 aaPredicted RBP9.85□□□□□ -0.83
TDP1-208ENST00000553989 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
TDP1-208ENST00000553989 NCAPH2Q6IBW4 605 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 ELMSAN1Q6PJG2 1045 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 OTOP3Q7RTS5 596 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 SRGAP1Q7Z6B7 1085 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 NEK8Q86SG6 692 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 ZNF280BQ86YH2 543 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 TMEM105Q8N8V8 129 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 DAGLBQ8NCG7 672 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 SLC22A17Q8WUG5 538 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 CEP89Q96ST8 783 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 KIF2CQ99661 725 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 LXNQ9BS40 222 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 KANSL3Q9P2N6 904 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 KCNJ14Q9UNX9 436 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 USTQ9Y2C2 406 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 DDHD2O94830 711 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 P4HBP07237 508 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 ADH1AP07327 375 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 CNPP09543 421 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 MYBP10242 640 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 ITGA4P13612 1032 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 GCFC2P16383 781 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 YWHABP31946 246 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 OR1G1P47890 313 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 CLCN4P51793 760 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 EVCP57679 992 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 FOXK1P85037 733 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 CYP4A11Q02928 519 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 NCBP1Q09161 790 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 LAMTOR4Q0VGL1 99 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 PPP2R5CQ13362 524 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 EMC2Q15006 297 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 XKR9Q5GH70 373 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 B3GNT9Q6UX72 402 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 AGMOQ6ZNB7 445 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 PIK3AP1Q6ZUJ8 805 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 OTUD6AQ7L8S5 288 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 GPR149Q86SP6 731 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 RNF149Q8NC42 400 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 TCP11Q8WWU5 503 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 PRPF31Q8WWY3 499 aaKnown RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 ZNF274Q96GC6 653 aaPredicted RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 MBOAT7Q96N66 472 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 KLHL5Q96PQ7 755 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 MTRQ99707 1265 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 TMEM175Q9BSA9 504 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 APOL6Q9BWW8 343 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 TRIM6Q9C030 488 aaPredicted RBP9.84□□□□□ -0.83
TDP1-208ENST00000553989 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 MAN1C1Q9NR34 630 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 VAV3Q9UKW4 847 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 SSX2IPQ9Y2D8 614 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 PPME1Q9Y570 386 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 TRIOO75962 3097 aa9.84□□□□□ -0.83
TDP1-208ENST00000553989 INO80B-WBP1J3KQ70 363 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 M0R2N6 131 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 NRP1O14786 923 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 GAS2O43903 313 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 B4GALT3O60512 393 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 NR1I2O75469 434 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 BAG4O95429 457 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 GLUD1P00367 558 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 SOD2P04179 222 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 GBP2P32456 591 aaPredicted RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 MLH1P40692 756 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 AFF1P51825 1210 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 TDGQ13569 410 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 CTTNQ14247 550 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 FERMT3Q86UX7 667 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 HACE1Q8IYU2 909 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 FAM177A1Q8N128 213 aaPredicted RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 CNNM3Q8NE01 707 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 FEZF2Q8TBJ5 459 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 STAMQ92783 540 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 SNX27Q96L92 541 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 HERC2P3Q9BVR0 1158 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 VN1R3Q9BXE9 311 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 DHX33Q9H6R0 707 aaKnown RBP9.83□□□□□ -0.84
TDP1-208ENST00000553989 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 UBN1Q9NPG3 1134 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 PDRG1Q9NUG6 133 aa9.83□□□□□ -0.84
TDP1-208ENST00000553989 DPP7Q9UHL4 492 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms