RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ESYT2A0FGR8 921 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SMCO2A6NFE2 343 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 C2CD2LO14523 706 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SLC30A4O14863 429 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 MYBP10242 640 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 RFX1P22670 979 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 MAGEA9P43362 315 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 GLUD2P49448 558 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 AK2P54819 239 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 PRKCQQ04759 706 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 CSTF1Q05048 431 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SNW1Q13573 536 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 POTEHQ6S545 545 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 RSPO2Q6UXX9 243 aaPredicted RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SMG8Q8ND04 991 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SHDQ96IW2 340 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 LRRC2Q9BYS8 371 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 BCO2Q9BYV7 579 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 MINDY3Q9H8M7 445 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 RSAD1Q9HA92 442 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 DISC1Q9NRI5 854 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SPATA6Q9NWH7 488 aaPredicted RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 CDH7Q9ULB5 785 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 ZFP37Q9Y6Q3 630 aaPredicted RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 TDRD15B5MCY1 1934 aaKnown RBP10.22□□□□□ -0.77
PRKCH-208ENST00000553846 CNTNAP2Q9UHC6 1331 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 AKAP13Q12802 2813 aa10.22□□□□□ -0.77
PRKCH-208ENST00000553846 VWA8A3KMH1 1905 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 LAMTOR5O43504 91 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 TBC1D4O60343 1298 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 ZMYND10O75800 440 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 NCLP19338 710 aaKnown RBP10.21□□□□□ -0.77
PRKCH-208ENST00000553846 ZNF76P36508 570 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 RPS9P46781 194 aaKnown RBP10.21□□□□□ -0.77
PRKCH-208ENST00000553846 CDC42EP1Q00587 391 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 JAKMIP3Q5VZ66 844 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 TSSK4Q6SA08 328 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 NFXL1Q6ZNB6 911 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 KSR1Q8IVT5 923 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 GSTCDQ8NEC7 633 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 EXOC6Q8TAG9 804 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 SLC5A5Q92911 643 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 B3GALT6Q96L58 329 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 SCLT1Q96NL6 688 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 LSG1Q9H089 658 aaKnown RBP10.21□□□□□ -0.77
PRKCH-208ENST00000553846 ZMYND12Q9H0C1 365 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 GLT8D2Q9H1C3 349 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 UNC45AQ9H3U1 944 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 FNIP2Q9P278 1114 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 DPP7Q9UHL4 492 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 FBXW11Q9UKB1 542 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
PRKCH-208ENST00000553846 PRG3Q9Y2Y8 225 aaPredicted RBP10.21□□□□□ -0.77
PRKCH-208ENST00000553846 FAM170BA6NMN3 283 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 SLC27A2O14975 620 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 MSH4O15457 936 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 MAFO75444 373 aaPredicted RBP10.2□□□□□ -0.78
PRKCH-208ENST00000553846 PSMD10O75832 226 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 POMCP01189 267 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 ALDH2P05091 517 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 POU2F2P09086 479 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 CD72P21854 359 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 FSHRP23945 695 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 PMLP29590 882 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 CDC27P30260 824 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 NTHL1P78549 312 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 SHC2P98077 582 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 AAMPQ13685 434 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 SLC44A4Q53GD3 710 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 PRR16Q569H4 304 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 ARID2Q68CP9 1835 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 URGCPQ8TCY9 931 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 NETO1Q8TDF5 533 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 RUFY2Q8WXA3 655 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 FGF13Q92913 245 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 PGBD4Q96DM1 585 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 RIT2Q99578 217 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 SH2D3AQ9BRG2 576 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 GPR62Q9BZJ7 368 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
PRKCH-208ENST00000553846 NRBP2Q9NSY0 501 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 MIOSQ9NXC5 875 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 KANSL3Q9P2N6 904 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 SSX2IPQ9Y2D8 614 aa10.2□□□□□ -0.78
PRKCH-208ENST00000553846 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.2□□□□□ -0.78
PRKCH-208ENST00000553846 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
PRKCH-208ENST00000553846 NID2Q14112 1375 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms