RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-210ENST00000553779 STAMQ92783 540 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 MAN1C1Q9NR34 630 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-210ENST00000553779 IRAK3Q9Y616 596 aa11.03□□□□□ -0.64
ACTN1-210ENST00000553779 M0R2N6 131 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-210ENST00000553779 EDIL3O43854 480 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 STBD1O95210 358 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 GLUD1P00367 558 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 MYBP10242 640 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 MLH1P40692 756 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 NUBP1P53384 320 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 SCRN1Q12765 414 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 ASTLQ6HA08 431 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-210ENST00000553779 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 AGMOQ6ZNB7 445 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 C4orf19Q8IY42 314 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 ZDHHC14Q8IZN3 488 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 CPB2Q96IY4 423 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 KLHL5Q96PQ7 755 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 SMOC2Q9H3U7 446 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.65
ACTN1-210ENST00000553779 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 RGL1Q9NZL6 768 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 USTQ9Y2C2 406 aa11.02□□□□□ -0.65
ACTN1-210ENST00000553779 EP300Q09472 2414 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-210ENST00000553779 ARL5CA6NH57 179 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 NRP1O14786 923 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 SOD2P04179 222 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
ACTN1-210ENST00000553779 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
ACTN1-210ENST00000553779 AXLP30530 894 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 CLCN4P51793 760 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.65
ACTN1-210ENST00000553779 NPY5RQ15761 445 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 GPR149Q86SP6 731 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
ACTN1-210ENST00000553779 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 SLC22A17Q8WUG5 538 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 GAD1Q99259 594 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 MINDY3Q9H8M7 445 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 IPPQ9Y573 584 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 GVINP1Q7Z2Y8 2422 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 VWA8A3KMH1 1905 aa11.01□□□□□ -0.65
ACTN1-210ENST00000553779 INPPL1O15357 1258 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 B4GALT3O60512 393 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 NEMFO60524 1076 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 TSPAN1O60635 241 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 USO1O60763 962 aaKnown RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 PFKFB2O60825 505 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 DGAT1O75907 488 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 DDHD2O94830 711 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 NPTXRO95502 500 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 SCNN1GP51170 649 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 CREMQ03060 361 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 TDGQ13569 410 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 MRPL10Q7Z7H8 261 aaKnown RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 HAS1Q92839 578 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 ZFP42Q96MM3 310 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 EIF2AK1Q9BQI3 630 aaKnown RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 EIF2AQ9BY44 585 aaKnown RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 CSRNP2Q9H175 543 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 GJB4Q9NTQ9 266 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
ACTN1-210ENST00000553779 PCDHA12Q9UN75 941 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 HES2Q9Y543 173 aa11□□□□□ -0.65
ACTN1-210ENST00000553779 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 CCDC195A0A1B0GUA6 201 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 FAM205CA6NFA0 338 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 DTNBO60941 627 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 LIG1P18858 919 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 HOXA11P31270 313 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-210ENST00000553779 TXKP42681 527 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 PTENP60484 403 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 NR5A1Q13285 461 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
ACTN1-210ENST00000553779 CAPSQ13938 189 aa10.99□□□□□ -0.65
ACTN1-210ENST00000553779 SAFBQ15424 915 aaKnown RBP eCLIP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 951.1 ms