RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 FSCN2O14926 492 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 SPTLC2O15270 562 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 PEX3P56589 373 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 GRIN1Q05586 938 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 CAMK1Q14012 370 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 BECN1Q14457 450 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 STK38Q15208 465 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 TCEAL5Q5H9L2 206 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 GPBP1Q86WP2 473 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 KCNG4Q8TDN1 519 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 PABPC5Q96DU9 382 aaKnown RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 FAM193BQ96PV7 902 aaPredicted RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 ASB2Q96Q27 587 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 PLIN2Q99541 437 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 CDCA3Q99618 268 aaPredicted RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 MRPL4Q9BYD3 311 aaKnown RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 PDZD7Q9H5P4 517 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 NRDE2Q9H7Z3 1164 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 NGRNQ9NPE2 291 aaKnown RBP9.12□□□□□ -0.95
PCNX1-204ENST00000553428 BLOC1S4Q9NUP1 217 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 CFAP45Q9UL16 551 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 TNFSF13BQ9Y275 285 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 INPP5FQ9Y2H2 1132 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 LOXHD1Q8IVV2 1947 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 COL4A4P53420 1690 aaPredicted RBP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ARL5CA6NH57 179 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 MEIS3P2A8K0S8 358 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ZC3H11AO75152 810 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 NR1I2O75469 434 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 FAM13AO94988 1023 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 NPTXRO95502 500 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ALDH2P05091 517 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 GALTP07902 379 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ZNF131P52739 623 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 BCAR1P56945 870 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 GRIK3Q13003 919 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 STRN3Q13033 797 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 GIT2Q14161 759 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 PUS10Q3MIT2 529 aaKnown RBP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 ATF7IP2Q5U623 682 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 RRAGBQ5VZM2 374 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 TMEM161BQ8NDZ6 487 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 MICAL1Q8TDZ2 1067 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 TMEM169Q96HH4 297 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 EPSTI1Q96J88 318 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 GAD1Q99259 594 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 KIFC3Q9BVG8 833 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 LRRC27Q9C0I9 530 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 NXF3Q9H4D5 531 aaKnown RBP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 UBE2ZQ9H832 354 aaPredicted RBP9.11□□□□□ -0.95
PCNX1-204ENST00000553428 PARVGQ9HBI0 331 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 PARP2Q9UGN5 583 aa9.11□□□□□ -0.95
PCNX1-204ENST00000553428 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 SLC16A4O15374 487 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 CUTAO60888 179 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 TBCAO75347 108 aaKnown RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 BRD1O95696 1058 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 KRT18P05783 430 aaKnown RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 MCF2P10911 925 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 LIG1P18858 919 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 DNAJB1P25685 340 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 MLH1P40692 756 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 DSC1Q08554 894 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 HYAL1Q12794 435 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 MCM6Q14566 821 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 CTC1Q2NKJ3 1217 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 LEXMQ3ZCV2 418 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 SPECC1Q5M775 1068 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 NT5DC1Q5TFE4 455 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 ZPBP2Q6X784 338 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 SV2BQ7L1I2 683 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 DDX53Q86TM3 631 aaKnown RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 COLGALT2Q8IYK4 626 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 EFHBQ8N7U6 833 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 IGSF21Q96ID5 467 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 CLIC6Q96NY7 704 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 RPS6KC1Q96S38 1066 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 ACO2Q99798 780 aaKnown RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 REEP2Q9BRK0 252 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 CUEDC2Q9H467 287 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 POLD4Q9HCU8 107 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 TOPORSQ9NS56 1045 aaPredicted RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
PCNX1-204ENST00000553428 FAN1Q9Y2M0 1017 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 HES2Q9Y543 173 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 ATP6V1DQ9Y5K8 247 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 IRAK3Q9Y616 596 aa9.1□□□□□ -0.95
PCNX1-204ENST00000553428 FNDC1Q4ZHG4 1894 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms