RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 GPM6BQ13491 265 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 E2F4Q16254 413 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 LRRC55Q6ZSA7 311 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 SV2BQ7L1I2 683 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 TAS1R3Q7RTX0 852 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 LEO1Q8WVC0 666 aaPredicted RBP20.32■□□□□ 0.84
CPSF2-202ENST00000553427 LPPQ93052 612 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 TRIM6Q9C030 488 aaPredicted RBP20.32■□□□□ 0.84
CPSF2-202ENST00000553427 RSAD1Q9HA92 442 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 KIAA1671Q9BY89 1806 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 EYSQ5T1H1 3165 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 TTLL13PA6NNM8 815 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 MEIS3P2A8K0S8 358 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 SFI1A8K8P3 1242 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 TBCAO75347 108 aaKnown RBP20.31■□□□□ 0.84
CPSF2-202ENST00000553427 FAM13AO94988 1023 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 KRT18P05783 430 aaKnown RBP20.31■□□□□ 0.84
CPSF2-202ENST00000553427 MAPTP10636 758 aaKnown RBP20.31■□□□□ 0.84
CPSF2-202ENST00000553427 ITGA4P13612 1032 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 DHX8Q14562 1220 aaKnown RBP20.31■□□□□ 0.84
CPSF2-202ENST00000553427 PTPROQ16827 1216 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 DCAF4L1Q3SXM0 396 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 NOMO2Q5JPE7 1267 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 NT5DC1Q5TFE4 455 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 RESP18Q5W5W9 173 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 MRPL38Q96DV4 380 aaKnown RBP20.31■□□□□ 0.84
CPSF2-202ENST00000553427 TNFSF13BQ9Y275 285 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 GIT1Q9Y2X7 761 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 PCDHB12Q9Y5F1 795 aa20.31■□□□□ 0.84
CPSF2-202ENST00000553427 SLC16A4O15374 487 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 NPTXRO95502 500 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 ABCD1P33897 745 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 CACNB1Q02641 598 aaPredicted RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 ATF7IP2Q5U623 682 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 APBB1IPQ7Z5R6 666 aaPredicted RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 URGCPQ8TCY9 931 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 SPATA32Q96LK8 384 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 ADPGKQ9BRR6 497 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 MRPL4Q9BYD3 311 aaKnown RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 SCAND2PQ9GZW5 306 aaPredicted RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 TNMDQ9H2S6 317 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 NXF3Q9H4D5 531 aaKnown RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 MAGEF1Q9HAY2 307 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 KANSL3Q9P2N6 904 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 HCSTQ9UBK5 93 aa20.3■□□□□ 0.84
CPSF2-202ENST00000553427 PRRC2BQ5JSZ5 2229 aaKnown RBP20.3■□□□□ 0.84
CPSF2-202ENST00000553427 MYMKA6NI61 221 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 PPM1AP35813 382 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 UBE3AQ05086 875 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 TMEM132AQ24JP5 1023 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
CPSF2-202ENST00000553427 IQUBQ8NA54 791 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 DDX12PQ92771 950 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 DNAJC19Q96DA6 116 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 ACO2Q99798 780 aaKnown RBP20.29■□□□□ 0.84
CPSF2-202ENST00000553427 PYM1Q9BRP8 204 aaKnown RBP20.29■□□□□ 0.84
CPSF2-202ENST00000553427 PTPRHQ9HD43 1115 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 TBC1D13Q9NVG8 400 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 KBTBD4Q9NVX7 518 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 FAM13BQ9NYF5 915 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 SEL1LQ9UBV2 794 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 PLAGL2Q9UPG8 496 aa20.29■□□□□ 0.84
CPSF2-202ENST00000553427 MYH11P35749 1972 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 LIG1P18858 919 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 PROZP22891 400 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 STRN3Q13033 797 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 TIGD5Q53EQ6 642 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 KCNT2Q6UVM3 1135 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 ZPBP2Q6X784 338 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 CDR2LQ86X02 465 aaPredicted RBP20.28■□□□□ 0.84
CPSF2-202ENST00000553427 MYCT1Q8N699 235 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 PDILTQ8N807 584 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 KLHL23Q8NBE8 558 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 ZNF558Q96NG5 402 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 FIZ1Q96SL8 496 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 LRRC27Q9C0I9 530 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 ST6GALNAC4Q9H4F1 302 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 HES2Q9Y543 173 aa20.28■□□□□ 0.84
CPSF2-202ENST00000553427 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 FRMD3A2A2Y4 597 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 ARL5CA6NH57 179 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 GRM6O15303 877 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 TRAK2O60296 914 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 ITGB1P05556 798 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 GAP43P17677 238 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 PLCB3Q01970 1234 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 LONRF3Q496Y0 759 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 ADALQ6DHV7 355 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 CNNM4Q6P4Q7 775 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 HAUS6Q7Z4H7 955 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 SPPL3Q8TCT6 385 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
CPSF2-202ENST00000553427 LZTS1Q9Y250 596 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 INPP5FQ9Y2H2 1132 aa20.27■□□□□ 0.84
CPSF2-202ENST00000553427 USP20Q9Y2K6 914 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms