RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 ELMSAN1Q6PJG2 1045 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 CABP7Q86V35 215 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 AUTS2Q8WXX7 1259 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 CPB2Q96IY4 423 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 SH2B1Q9NRF2 756 aaPredicted RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 MRPL17Q9NRX2 175 aaKnown RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 TMEM221A6NGB7 291 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 ARL5CA6NH57 179 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 LRRIQ4A6NIV6 560 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 M0R296 226 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 NRP1O14786 923 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 DDHD2O94830 711 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 SEC24BO95487 1268 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 URODP06132 367 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 GLRA2P23416 452 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 KLRC2P26717 231 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 MBTD1Q05BQ5 628 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 PTPN14Q15678 1187 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 TMEM132AQ24JP5 1023 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 RARS2Q5T160 578 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 HAUS3Q68CZ6 603 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 BMP8AQ7Z5Y6 402 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 ZBTB8OSQ8IWT0 167 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 SUGP1Q8IWZ8 645 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 SMG8Q8ND04 991 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 ASAP3Q8TDY4 903 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 FBXL18Q96ME1 805 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 GAD1Q99259 594 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 POLR3CQ9BUI4 534 aaPredicted RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 TMEM60Q9H2L4 133 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 DPP7Q9UHL4 492 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 NOL7Q9UMY1 257 aaKnown RBP14.14□□□□□ -0.15
LINC00643-202ENST00000553426 GIT1Q9Y2X7 761 aa14.14□□□□□ -0.15
LINC00643-202ENST00000553426 WNT7AO00755 349 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 ARF4P18085 180 aaPredicted RBP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 MLH1P40692 756 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 OR1G1P47890 313 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 SIGLEC14Q08ET2 396 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 ZNF174Q15697 407 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 SLC27A1Q6PCB7 646 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 MAEAQ7L5Y9 396 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 BCL7CQ8WUZ0 217 aaPredicted RBP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 PRIMPOLQ96LW4 560 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 APOL6Q9BWW8 343 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 C2orf40Q9H1Z8 148 aa14.13□□□□□ -0.15
LINC00643-202ENST00000553426 PRMT7Q9NVM4 692 aaPredicted RBP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 PRG3Q9Y2Y8 225 aaPredicted RBP14.13□□□□□ -0.15
LINC00643-202ENST00000553426 A0A087WWV3 80 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 ARHGEF35A5YM69 484 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 INPPL1O15357 1258 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 SOD2P04179 222 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 EPCAMP16422 314 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 MUTP22033 750 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 RPA1P27694 616 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 SCNN1GP51170 649 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 AFF1P51825 1210 aaKnown RBP14.12□□□□□ -0.15
LINC00643-202ENST00000553426 ST3GAL1Q11201 340 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 PTPN21Q16825 1174 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 TTC38Q5R3I4 469 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 KIAA1841Q6NSI8 718 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 NOSTRINQ8IVI9 506 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 COLGALT2Q8IYK4 626 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 RPS6KC1Q96S38 1066 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 COLEC11Q9BWP8 271 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 RAB34Q9BZG1 259 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 PARP2Q9UGN5 583 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 KIF3AQ9Y496 699 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 HES2Q9Y543 173 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
LINC00643-202ENST00000553426 A0A1B0GUA9 196 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 C2CD2LO14523 706 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 B4GALT3O60512 393 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 MED24O75448 989 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 NPTXRO95502 500 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 ADH1AP07327 375 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 PPP2R5AQ15172 486 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 AMHR2Q16671 573 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 PADI6Q6TGC4 694 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 C12orf76Q8N812 135 aaPredicted RBP14.11□□□□□ -0.15
LINC00643-202ENST00000553426 TDRD5Q8NAT2 981 aaKnown RBP14.11□□□□□ -0.15
LINC00643-202ENST00000553426 SLC22A17Q8WUG5 538 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 PHOX2BQ99453 314 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms