RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 KCNC3Q14003 757 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 EEF1DP3Q658K8 133 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 HSCBQ8IWL3 235 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 ZBTB8OSQ8IWT0 167 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 EPSTI1Q96J88 318 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 TIPINQ9BVW5 301 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 VN1R3Q9BXE9 311 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 C17orf75Q9HAS0 396 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 PTPRHQ9HD43 1115 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 KCND2Q9NZV8 630 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 DNAJB4Q9UDY4 337 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 BDP1A6H8Y1 2624 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 PRKCBP05771 671 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 PLCG1P19174 1290 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 MARCKSP29966 332 aaPredicted RBP21.28■■□□□ 1
PTCH1-227ENST00000553256 EFNA5P52803 228 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 PEX3P56589 373 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 KARSQ15046 597 aaKnown RBP21.28■■□□□ 1
PTCH1-227ENST00000553256 SKIV2LQ15477 1246 aaKnown RBP21.28■■□□□ 1
PTCH1-227ENST00000553256 MAPK6Q16659 721 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 LEXMQ3ZCV2 418 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 THNSL1Q8IYQ7 743 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.28■■□□□ 1
PTCH1-227ENST00000553256 SPIRE2Q8WWL2 714 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 CLIC6Q96NY7 704 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 TMEM134Q9H6X4 195 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 UBN1Q9NPG3 1134 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 TLR9Q9NR96 1032 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 SPG21Q9NZD8 308 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 GIT1Q9Y2X7 761 aa21.28■■□□□ 1
PTCH1-227ENST00000553256 ARL5CA6NH57 179 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 NPTXRO95502 500 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 ITGA4P13612 1032 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 PPM1AP35813 382 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 UBA7P41226 1012 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 SLC11A1P49279 550 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 DLX2Q07687 328 aaPredicted RBP21.27■■□□□ 1
PTCH1-227ENST00000553256 ADAM15Q13444 863 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 SPOUT1Q5T280 376 aaKnown RBP21.27■■□□□ 1
PTCH1-227ENST00000553256 LINC00301Q8NCQ3 95 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 DEPTORQ8TB45 409 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 RAD54LQ92698 747 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 IFT74Q96LB3 600 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 DRC1Q96MC2 740 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 ZFP42Q96MM3 310 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 FIZ1Q96SL8 496 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 GAD1Q99259 594 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 CXCL16Q9H2A7 254 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 INPP5FQ9Y2H2 1132 aa21.27■■□□□ 1
PTCH1-227ENST00000553256 NPHP3-ACAD11A0A0J9YXS1 232 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 SFI1A8K8P3 1242 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 NT5C1B-RDH14C9J2C7 533 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 DLL1O00548 723 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 LINC01565O15544 149 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 GLP2RO95838 553 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 PROZP22891 400 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 ZNF131P52739 623 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 NCBP1Q09161 790 aaKnown RBP21.26■□□□□ 0.99
PTCH1-227ENST00000553256 PRPF4BQ13523 1007 aaKnown RBP21.26■□□□□ 0.99
PTCH1-227ENST00000553256 ZRSR1Q15695 479 aaKnown RBP21.26■□□□□ 0.99
PTCH1-227ENST00000553256 SPECC1Q5M775 1068 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 COLGALT2Q8IYK4 626 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 RNF168Q8IYW5 571 aaPredicted RBP21.26■□□□□ 0.99
PTCH1-227ENST00000553256 TMEM161BQ8NDZ6 487 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 VN1R2Q8NFZ6 395 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 IGSF21Q96ID5 467 aa21.26■□□□□ 0.99
PTCH1-227ENST00000553256 NCK2O43639 380 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 TBX10O75333 385 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 PLS3P13797 630 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 AKAP5P24588 427 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 MLH1P40692 756 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 NAB2Q15742 525 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 PDE12Q6L8Q7 609 aaKnown RBP21.25■□□□□ 0.99
PTCH1-227ENST00000553256 EFHBQ8N7U6 833 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 SYMPKQ92797 1274 aaKnown RBP21.25■□□□□ 0.99
PTCH1-227ENST00000553256 TMEM175Q9BSA9 504 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 MARCH5Q9NX47 278 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 CLEC1BQ9P126 229 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 KANSL3Q9P2N6 904 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 TNFSF13BQ9Y275 285 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 PHLPP2Q6ZVD8 1323 aa21.25■□□□□ 0.99
PTCH1-227ENST00000553256 A0A087X0B3 334 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 HIDE1A8MVS5 230 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 N4BP3O15049 544 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 ZC3H11AO75152 810 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTCH1-227ENST00000553256 POMCP01189 267 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 ZSCAN22P10073 491 aaPredicted RBP21.24■□□□□ 0.99
PTCH1-227ENST00000553256 KCNA5P22460 613 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 SCNN1GP51170 649 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 CEBPZQ03701 1054 aaKnown RBP21.24■□□□□ 0.99
PTCH1-227ENST00000553256 GIT2Q14161 759 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 MCM6Q14566 821 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 AAK1Q2M2I8 961 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 CALML4Q96GE6 196 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 MSLNLQ96KJ4 702 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 ACO2Q99798 780 aaKnown RBP21.24■□□□□ 0.99
PTCH1-227ENST00000553256 REEP2Q9BRK0 252 aa21.24■□□□□ 0.99
PTCH1-227ENST00000553256 DAXXQ9UER7 740 aaPredicted RBP21.24■□□□□ 0.99
PTCH1-227ENST00000553256 MYH15Q9Y2K3 1946 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 K7ERI5 159 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms