RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PPM1AP35813 382 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 CACNB1Q02641 598 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 PRPF4BQ13523 1007 aaKnown RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 ARSHQ5FYA8 562 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 EEF1DP3Q658K8 133 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 TMEM173Q86WV6 379 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 MRPS27Q92552 414 aaKnown RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 EPSTI1Q96J88 318 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 DRC1Q96MC2 740 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 TRIM6Q9C030 488 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 GBP3Q9H0R5 595 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 TLR9Q9NR96 1032 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 SPG21Q9NZD8 308 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 SRPRBQ9Y5M8 271 aaKnown RBP20.72■□□□□ 0.91
HDAC4-217ENST00000553145 CCDC169A6NNP5 214 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 DLL1O00548 723 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 FSCN2O14926 492 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 INPPL1O15357 1258 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 DDHD2O94830 711 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 POMCP01189 267 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 AKAP5P24588 427 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 MLH1P40692 756 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 NASPP49321 788 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-217ENST00000553145 EFNA5P52803 228 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 RNASELQ05823 741 aaKnown RBP20.71■□□□□ 0.91
HDAC4-217ENST00000553145 PKP1Q13835 747 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 SLC39A14Q15043 492 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 NT5DC1Q5TFE4 455 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 TAS1R3Q7RTX0 852 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 URGCPQ8TCY9 931 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 BCL7CQ8WUZ0 217 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-217ENST00000553145 PABPC5Q96DU9 382 aaKnown RBP20.71■□□□□ 0.91
HDAC4-217ENST00000553145 ZFP42Q96MM3 310 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 GAD1Q99259 594 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 TIPINQ9BVW5 301 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 MIOSQ9NXC5 875 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 LZTS1Q9Y250 596 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 PHLPP2Q6ZVD8 1323 aa20.71■□□□□ 0.91
HDAC4-217ENST00000553145 ARL5CA6NH57 179 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 N4BP3O15049 544 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 LINC01565O15544 149 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 GALTP07902 379 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 BMP1P13497 986 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 KCNA5P22460 613 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 SLC11A1P49279 550 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 ALDH7A1P49419 539 aaKnown RBP20.7■□□□□ 0.9
HDAC4-217ENST00000553145 DMP1Q13316 513 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-217ENST00000553145 DHX8Q14562 1220 aaKnown RBP20.7■□□□□ 0.9
HDAC4-217ENST00000553145 MCM6Q14566 821 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 RASSF8Q8NHQ8 419 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 RAD54LQ92698 747 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 SYMPKQ92797 1274 aaKnown RBP20.7■□□□□ 0.9
HDAC4-217ENST00000553145 UBN1Q9NPG3 1134 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-217ENST00000553145 BRWD1Q9NSI6 2320 aa20.7■□□□□ 0.9
HDAC4-217ENST00000553145 K7ERI5 159 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 SLC16A4O15374 487 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 ZSCAN22P10073 491 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-217ENST00000553145 SCNN1GP51170 649 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 TMEM132AQ24JP5 1023 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 AAK1Q2M2I8 961 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 CTC1Q2NKJ3 1217 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 GPBP1Q86WP2 473 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 IGFLR1Q9H665 355 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 C17orf75Q9HAS0 396 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 KMT5AQ9NQR1 393 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 CLDND1Q9NY35 253 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 KCND2Q9NZV8 630 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 KLK14Q9P0G3 267 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 TFIP11Q9UBB9 837 aaKnown RBP20.69■□□□□ 0.9
HDAC4-217ENST00000553145 GIT1Q9Y2X7 761 aa20.69■□□□□ 0.9
HDAC4-217ENST00000553145 SPTBN5Q9NRC6 3674 aaKnown RBP20.68■□□□□ 0.9
HDAC4-217ENST00000553145 H3BQ06 376 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-217ENST00000553145 F13A1P00488 732 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 PLS3P13797 630 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 LTBRP36941 435 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 NRIP1P48552 1158 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 KRT17Q04695 432 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 PLPP4Q5VZY2 271 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 EP400NLQ6ZTU2 488 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 RBM23Q86U06 439 aaKnown RBP20.68■□□□□ 0.9
HDAC4-217ENST00000553145 LINC00301Q8NCQ3 95 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 GSTCDQ8NEC7 633 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 MICAL1Q8TDZ2 1067 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 IGSF21Q96ID5 467 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 TCF25Q9BQ70 676 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 REEP2Q9BRK0 252 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 TMEM134Q9H6X4 195 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 KANSL3Q9P2N6 904 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 PARP2Q9UGN5 583 aa20.68■□□□□ 0.9
HDAC4-217ENST00000553145 XIRP2A4UGR9 3374 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 TBX10O75333 385 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 DLX2Q07687 328 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-217ENST00000553145 LEXMQ3ZCV2 418 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 ATF7IP2Q5U623 682 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 HACE1Q8IYU2 909 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 KRI1Q8N9T8 703 aaKnown RBP20.67■□□□□ 0.9
HDAC4-217ENST00000553145 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms