RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 NARFQ9UHQ1 456 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 INTUQ9ULD6 942 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 NENFQ9UMX5 172 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 FRMD4BQ9Y2L6 1034 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
SYT1-212ENST00000552744 USP15Q9Y4E8 981 aaPredicted RBP8.4□□□□□ -1.06
SYT1-212ENST00000552744 IRS2Q9Y4H2 1338 aa8.4□□□□□ -1.07
SYT1-212ENST00000552744 TISP43B9A030 160 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SNHG28P0DPA3 235 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 HOXA7P31268 230 aaPredicted RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 GCKP35557 465 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 PTGIRP43119 386 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 MYL7Q01449 175 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SPIRE1Q08AE8 756 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 KYNUQ16719 465 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 TRIM68Q6AZZ1 485 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 HS2ST1Q7LGA3 356 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 ERICH1Q86X53 443 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 FAM178BQ8IXR5 827 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SLC17A8Q8NDX2 589 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 MAGEC3Q8TD91 643 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 FAM118BQ9BPY3 351 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 EIF2AK1Q9BQI3 630 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 TAOK3Q9H2K8 898 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 CDC42EP4Q9H3Q1 356 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 APEX2Q9UBZ4 518 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SYNGAP1Q96PV0 1343 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 MEIS2O14770 477 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SUN1O94901 812 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 CHRNA3P32297 505 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 STX2P32856 288 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 DLG4P78352 724 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 ODR4Q5SWX8 454 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 FITM2Q8N6M3 262 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 ATG4AQ8WYN0 398 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 KAT5Q92993 513 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 AGPAT1Q99943 283 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 SH2D3AQ9BRG2 576 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 GPR88Q9GZN0 384 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 TTC7AQ9ULT0 858 aaPredicted RBP8.39□□□□□ -1.07
SYT1-212ENST00000552744 PFASO15067 1338 aa8.39□□□□□ -1.07
SYT1-212ENST00000552744 PODXLO00592 558 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 MSH4O15457 936 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 CLDN3O15551 220 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 GSTA1P08263 222 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 BRAFP15056 766 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 GCLMP48507 274 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 COPS2P61201 443 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 FAM43BQ6ZT52 329 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 SRRM1Q8IYB3 904 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 CNBD1Q8NA66 436 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 OLIG1Q8TAK6 271 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 STMN4Q9H169 189 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 MTUS1Q9ULD2 1270 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 CFAP73A6NFT4 308 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 SLC16A3O15427 465 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 MYBL1P10243 752 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 RARGP13631 454 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 CHKAP35790 457 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 COILP38432 576 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 RNASELQ05823 741 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 DYDC2Q96IM9 177 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 RMDN2Q96LZ7 410 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 ZNF570Q96NI8 536 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 TGS1Q96RS0 853 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 LBHD1Q9BQE6 289 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 ZSWIM1Q9BR11 485 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 EBF2Q9HAK2 575 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 ETNK1Q9HBU6 452 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 DIS3Q9Y2L1 958 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 NCANO14594 1321 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 PASKQ96RG2 1323 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 LAMB2P55268 1798 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 DDX39AO00148 427 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 SGPL1O95470 568 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 ECEL1O95672 775 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 EEF2P13639 858 aaKnown RBP8.38□□□□□ -1.07
SYT1-212ENST00000552744 SHMT1P34896 483 aa8.38□□□□□ -1.07
SYT1-212ENST00000552744 MSH2P43246 934 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms