RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 URODP06132 367 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 NEFLP07196 543 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 SLC26A2P50443 739 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 CCR3P51677 355 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 HEATR6Q6AI08 1181 aaKnown RBP11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 GLB1LQ6UWU2 654 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 AGMOQ6ZNB7 445 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 MTSS1LQ765P7 747 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 GLYCTKQ8IVS8 523 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 TRAIPQ9BWF2 469 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 AGO4Q9HCK5 861 aaKnown RBP11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF213O14771 459 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 CHRNB1P11230 501 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 CXCL12P48061 93 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 GLUD2P49448 558 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 DSG1Q02413 1049 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 TROAPQ12815 778 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 TRAF1Q13077 416 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 DRP2Q13474 957 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 TANGO2Q6ICL3 276 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 SWSAP1Q6NVH7 229 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 PDXDC2PQ6P474 469 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 MBOAT7Q96N66 472 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 MXRA8Q9BRK3 442 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 CHST7Q9NS84 486 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 HCFC1R1Q9NWW0 138 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 CACNA2D2Q9NY47 1150 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 PRG3Q9Y2Y8 225 aaPredicted RBP11.6□□□□□ -0.55
SLC48A1-209ENST00000552003 DDX39AO00148 427 aaKnown RBP11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 BACH1O14867 736 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 EPN2O95208 641 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 POMCP01189 267 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 ALDH2P05091 517 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 CNR2P34972 360 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 RAP1GAPP47736 663 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 COL28A1Q2UY09 1125 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 SH3PXD2AQ5TCZ1 1133 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 KIAA1211LQ6NV74 962 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 ING5Q8WYH8 240 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF302Q9NR11 478 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 FAM105AQ9NUU6 356 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
SLC48A1-209ENST00000552003 C4orf47A7E2U8 309 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 HYAL3O43820 417 aaPredicted RBP11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 ZNF623O75123 536 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 MX1P20591 662 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 FCARP24071 287 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 Q6ZS52 159 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 KBTBD6Q86V97 674 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 CUL5Q93034 780 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 SDF4Q9BRK5 362 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 TMEM175Q9BSA9 504 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 GPR62Q9BZJ7 368 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 CHST12Q9NRB3 414 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 RBM12Q9NTZ6 932 aaKnown RBP11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 DPP7Q9UHL4 492 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 KLK13Q9UKR3 277 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 ZNF462Q96JM2 2506 aa11.58□□□□□ -0.56
SLC48A1-209ENST00000552003 CARNS1A5YM72 827 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 CCL16O15467 120 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 ECI2O75521 394 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 PAPSS2O95340 614 aaPredicted RBP11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 C1RP00736 705 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 GRM2Q14416 872 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 SLC5A9Q2M3M2 681 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 TWF2Q6IBS0 349 aaKnown RBP11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 CEP68Q76N32 757 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 PROSER1Q86XN7 944 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 PGBD1Q96JS3 809 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 PSTPIP2Q9H939 334 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 MIOSQ9NXC5 875 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 FBXW11Q9UKB1 542 aa11.57□□□□□ -0.56
SLC48A1-209ENST00000552003 ATG2BQ96BY7 2078 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 MEIS1O00470 390 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms