RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 B4GALNT2Q8NHY0 566 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 SYNGAP1Q96PV0 1343 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 E7ENQ6 273 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 MEIS1O00470 390 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 NR3C1P04150 777 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 ALAS1P13196 640 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 POLGP54098 1239 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 CCDC15Q0P6D6 951 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 MESDQ14696 234 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 TRIP13Q15645 432 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 ARHGAP44Q17R89 818 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 DZIP1Q86YF9 867 aaKnown RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 ENDOVQ8N8Q3 282 aaKnown RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
ERBB3-219ENST00000551242 PCMTD2Q9NV79 361 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 DNAJC12Q9UKB3 198 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 LAMB1P07942 1786 aa13.12□□□□□ -0.31
ERBB3-219ENST00000551242 LRRN2O75325 713 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 CHRNB2P17787 502 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 PSMC6P62333 389 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 RCN2Q14257 317 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ZNF568Q3ZCX4 644 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 KHDC1Q4VXA5 237 aaKnown RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ZSWIM1Q9BR11 485 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 PASKQ96RG2 1323 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ABLIM1O14639 778 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 NVLO15381 856 aaKnown RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 SPAG7O75391 227 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 NTSR2O95665 410 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 TTLL1O95922 423 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 RBBP8NLQ8NC74 664 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
ERBB3-219ENST00000551242 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 RSPH10B2B2RC85 870 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
ERBB3-219ENST00000551242 MED24O75448 989 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 RSPH10BP0C881 870 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 COMTP21964 271 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 RANBP1P43487 201 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
ERBB3-219ENST00000551242 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ZFAND2BQ8WV99 257 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 C1orf54Q8WWF1 131 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 TTC4O95801 387 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 DLATP10515 647 aaKnown RBP13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ATP5DP30049 168 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 VPS41P49754 854 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 STRN3Q13033 797 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 LRRC8CQ8TDW0 803 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 EYA3Q99504 573 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 SYT11Q9BT88 431 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
ERBB3-219ENST00000551242 VCXQ9H320 206 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ASIC3Q9UHC3 531 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 G3BP2Q9UN86 482 aaKnown RBP13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ASTN1O14525 1302 aa13.1□□□□□ -0.31
ERBB3-219ENST00000551242 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 THAP12O43422 761 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ECEL1O95672 775 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SLC12A3P55017 1021 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CCDC6Q16204 474 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms