RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 TMEM174Q8WUU8 243 aa15.45■□□□□ 0.06
CACNB3-216ENST00000550391 DHX38Q92620 1227 aaKnown RBP15.45■□□□□ 0.06
CACNB3-216ENST00000550391 BICD1Q96G01 975 aa15.45■□□□□ 0.06
CACNB3-216ENST00000550391 GCOM2Q9BZD3 368 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-216ENST00000550391 SENP6Q9GZR1 1112 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-216ENST00000550391 CDHR5Q9HBB8 845 aa15.45■□□□□ 0.06
CACNB3-216ENST00000550391 AGPAT3Q9NRZ7 376 aa15.45■□□□□ 0.06
CACNB3-216ENST00000550391 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-216ENST00000550391 NOD1Q9Y239 953 aa15.45■□□□□ 0.06
CACNB3-216ENST00000550391 ANKRD63C9JTQ0 380 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 INO80B-WBP1J3KQ70 363 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 ACKR2O00590 384 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 CETN3O15182 167 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 CLIC2O15247 247 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 NR3C1P04150 777 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 IQCF3P0C7M6 154 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 NR2F2P24468 414 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 LIG4P49917 911 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 CRYBB1P53674 252 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 MRPS6P82932 125 aaKnown RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 ADAM9Q13443 819 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 TRIM71Q2Q1W2 868 aaKnown RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 SLC39A4Q6P5W5 647 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 SLC39A5Q6ZMH5 540 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 SLC9A9Q8IVB4 645 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 C12orf56Q8IXR9 622 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 FAM126BQ8IXS8 530 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 MRPL4Q9BYD3 311 aaKnown RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 CELF4Q9BZC1 486 aaKnown RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 INO80BQ9C086 356 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 TRPV6Q9H1D0 765 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 DMAC2Q9NW81 257 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 MAGEC2Q9UBF1 373 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-216ENST00000550391 CDH23Q9H251 3354 aa15.44■□□□□ 0.06
CACNB3-216ENST00000550391 TISP43B9A030 160 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 M0QZ92 97 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 HNRNPDLO14979 420 aaKnown RBP15.43■□□□□ 0.06
CACNB3-216ENST00000550391 GNA14O95837 355 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 CD4P01730 458 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 DARSP14868 501 aaKnown RBP15.43■□□□□ 0.06
CACNB3-216ENST00000550391 FOSL2P15408 326 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 SPAG1Q07617 926 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 MGAT3Q09327 533 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.06
CACNB3-216ENST00000550391 AMHR2Q16671 573 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 C1orf53Q5VUE5 145 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 ARMCX5Q6P1M9 558 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 FILIP1Q7Z7B0 1213 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 IRF2BP1Q8IU81 584 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 ANKRD20A12PQ8NF67 263 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 OSMRQ99650 979 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 TARS2Q9BW92 718 aaKnown RBP15.43■□□□□ 0.06
CACNB3-216ENST00000550391 GINS2Q9Y248 185 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 USP20Q9Y2K6 914 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 TRPV2Q9Y5S1 764 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 CDY2AQ9Y6F7 541 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 STYXL1Q9Y6J8 313 aa15.43■□□□□ 0.06
CACNB3-216ENST00000550391 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 CAND2O75155 1236 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 CSDE1O75534 798 aaKnown RBP15.42■□□□□ 0.06
CACNB3-216ENST00000550391 CHRNA1P02708 482 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 ATP1A3P13637 1013 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 GARTP22102 1010 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 EIF4BP23588 611 aaKnown RBP15.42■□□□□ 0.06
CACNB3-216ENST00000550391 EEF1GP26641 437 aaKnown RBP15.42■□□□□ 0.06
CACNB3-216ENST00000550391 ADSSP30520 456 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 THPOP40225 353 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
CACNB3-216ENST00000550391 KCNJ12Q14500 433 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 SNX17Q15036 470 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 HSP90AA4PQ58FG1 418 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 FAM26DQ5JW98 314 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 SLFN12LQ6IEE8 588 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 SARM1Q6SZW1 724 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 TMEM40Q8WWA1 233 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 MYLIPQ8WY64 445 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 EEF2KMTQ96G04 330 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 SNX27Q96L92 541 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 ACO2Q99798 780 aaKnown RBP15.42■□□□□ 0.06
CACNB3-216ENST00000550391 CBWD1Q9BRT8 395 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 MROH7Q68CQ1 1323 aa15.42■□□□□ 0.06
CACNB3-216ENST00000550391 KIAA0391O15091 583 aaKnown RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 B4GALT5O43286 388 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 TSPAN1O60635 241 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 CYP2J2P51589 502 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 FANCCQ00597 558 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 PLCB2Q00722 1185 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 RBL2Q08999 1139 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
CACNB3-216ENST00000550391 CEP135Q66GS9 1140 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 ANKRD33Q7Z3H0 272 aa15.41■□□□□ 0.06
CACNB3-216ENST00000550391 CREBRFQ8IUR6 639 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms