RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 SRSF2Q01130 221 aaKnown RBP5.39□□□□□ -1.55
SNRPF-202ENST00000549580 BIRC2Q13490 618 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 ACAP2Q15057 778 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 UGT8Q16880 541 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 PAN2Q504Q3 1202 aaKnown RBP5.39□□□□□ -1.55
SNRPF-202ENST00000549580 CYB5RLQ6IPT4 315 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 SLC4A10Q6U841 1118 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 MORC4Q8TE76 937 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 LARP4BQ92615 738 aaKnown RBP5.39□□□□□ -1.55
SNRPF-202ENST00000549580 E2F7Q96AV8 911 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 EAF2Q96CJ1 260 aaPredicted RBP5.39□□□□□ -1.55
SNRPF-202ENST00000549580 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 SLC12A5Q9H2X9 1139 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 ZFP69BQ9UJL9 534 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 PPP2R3BQ9Y5P8 575 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 PRSS38A1L453 326 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 HSPA6P17066 643 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 C5AR1P21730 350 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
SNRPF-202ENST00000549580 AOAHP28039 575 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
SNRPF-202ENST00000549580 GRM3Q14832 879 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNRPF-202ENST00000549580 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 CT83Q5H943 113 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 PITRM1Q5JRX3 1037 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 TOR2AQ5JU69 321 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 TTC38Q5R3I4 469 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 ZBTB41Q5SVQ8 909 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 VASNQ6EMK4 673 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 TIGD7Q6NT04 549 aaPredicted RBP5.38□□□□□ -1.55
SNRPF-202ENST00000549580 KSR2Q6VAB6 950 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 ZNF627Q7L945 461 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 KANSL1Q7Z3B3 1105 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 SAMD3Q8N6K7 520 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 C7orf31Q8N865 590 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 SLC35G2Q8TBE7 412 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 RAX2Q96IS3 184 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 SARGQ9BW04 601 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 ANO3Q9BYT9 981 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 POFUT1Q9H488 388 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 MYH16Q9H6N6 1097 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 MMRN2Q9H8L6 949 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 RCAN3Q9UKA8 241 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 TMPRSS11EQ9UL52 423 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 DMRT1Q9Y5R6 373 aa5.38□□□□□ -1.55
SNRPF-202ENST00000549580 UBA6A0AVT1 1052 aaPredicted RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 EIF3JO75822 258 aaKnown RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 PRPF6O94906 941 aaKnown RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 MPIG6BO95866 241 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 CLEC2LP0C7M8 214 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 MTHFD2P13995 350 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 GALEQ14376 348 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 MYBPC3Q14896 1274 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 RNF151Q2KHN1 245 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 SYCP2LQ5T4T6 812 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 GORABQ5T7V8 394 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 LYSMD2Q8IV50 215 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 SMC5Q8IY18 1101 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 CACTINQ8WUQ7 758 aaKnown RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 TAAR9Q96RI9 348 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 FOXB1Q99853 325 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 DPYSL5Q9BPU6 564 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 MYL10Q9BUA6 226 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 QRSL1Q9H0R6 528 aaKnown RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 PRDM12Q9H4Q4 367 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 DDX20Q9UHI6 824 aaKnown RBP5.37□□□□□ -1.55
SNRPF-202ENST00000549580 NUMBLQ9Y6R0 609 aa5.37□□□□□ -1.55
SNRPF-202ENST00000549580 PRAMEF22A3QJZ6 481 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 NDUFS2O75306 463 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 RAD17O75943 681 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 IL18BPO95998 194 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 PRLP01236 227 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 POU2F2P09086 479 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 ALDH6A1Q02252 535 aaKnown RBP5.36□□□□□ -1.55
SNRPF-202ENST00000549580 MUM1Q2TAK8 710 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 ARHGAP29Q52LW3 1261 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 ATAT1Q5SQI0 421 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 IFIT1BQ5T764 474 aaKnown RBP5.36□□□□□ -1.55
SNRPF-202ENST00000549580 KIAA1841Q6NSI8 718 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 PPP4R4Q6NUP7 873 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 CCDC62Q6P9F0 684 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 CHST15Q7LFX5 561 aaPredicted RBP5.36□□□□□ -1.55
SNRPF-202ENST00000549580 SLC41A1Q8IVJ1 513 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 IFNL2Q8IZJ0 200 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 HIPK4Q8NE63 616 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 PJA1Q8NG27 643 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 RSAD2Q8WXG1 361 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 ERCC4Q92889 916 aaPredicted RBP5.36□□□□□ -1.55
SNRPF-202ENST00000549580 LRGUKQ96M69 825 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 OR14A2Q96R54 314 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 TUBGCP5Q96RT8 1024 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 DDX21Q9NR30 783 aaKnown RBP eCLIP5.36□□□□□ -1.55
SNRPF-202ENST00000549580 KCND1Q9NSA2 647 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms