RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PIAS1O75925 651 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 KIF4AO95239 1232 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 UCHL3P15374 230 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 MESDQ14696 234 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 LMBRD2Q68DH5 695 aaPredicted RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CCDC13Q8IYE1 715 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 FZD1Q9UP38 647 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 RIPK3Q9Y572 518 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 SSU72P8A0A1W2PR75 194 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 PJA2O43164 708 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 LYPLA2O95372 231 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 MAP2K2P36507 400 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 SKOR1P84550 965 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 ITGB3BPQ13352 177 aaPredicted RBP11.97□□□□□ -0.49
LINC00661-204ENST00000549354 EDRF1Q3B7T1 1238 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 KDM7AQ6ZMT4 941 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 RNF207Q6ZRF8 634 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 RNF10Q8N5U6 811 aaKnown RBP11.97□□□□□ -0.49
LINC00661-204ENST00000549354 KAT5Q92993 513 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 IQCDQ96DY2 449 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 NACC1Q96RE7 527 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 OLFML3Q9NRN5 406 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 HAUS2Q9NVX0 235 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 HOXC10Q9NYD6 342 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 EVI5O60447 810 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 GAP43P17677 238 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 PAIP2Q9BPZ3 127 aaKnown RBP11.97□□□□□ -0.49
LINC00661-204ENST00000549354 TBC1D22BQ9NU19 505 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 TBK1Q9UHD2 729 aa11.97□□□□□ -0.49
LINC00661-204ENST00000549354 EXOC3O60645 756 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 LCA5LO95447 670 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 RDXP35241 583 aaKnown RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 GCLMP48507 274 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF131P52739 623 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF844Q08AG5 666 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 VGLL4Q14135 290 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 TMEM132BQ14DG7 1078 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 LLGL2Q6P1M3 1020 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 DCPSQ96C86 337 aaKnown RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 TBC1D31Q96DN5 1066 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 RNF146Q9NTX7 359 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 VSIG10LQ86VR7 867 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.49
LINC00661-204ENST00000549354 WRAP73Q9P2S5 460 aaPredicted RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 CTDP1Q9Y5B0 961 aaPredicted RBP11.96□□□□□ -0.49
LINC00661-204ENST00000549354 SPDYE16A6NNV3 312 aaPredicted RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 MAFGO15525 162 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 GNA14O95837 355 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 RPSAP08865 295 aaKnown RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 EPB41P11171 864 aaKnown RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 HOXD13P35453 343 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 MARCKSL1P49006 195 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 ODR4Q5SWX8 454 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 USP50Q70EL3 339 aaPredicted RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 SLC30A5Q8TAD4 765 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 ZNF668Q96K58 619 aaPredicted RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 SENP7Q9BQF6 1050 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.5
LINC00661-204ENST00000549354 NAGPAQ9UK23 515 aa11.96□□□□□ -0.5
LINC00661-204ENST00000549354 CPP00450 1065 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 ERFP50548 548 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 ITIH3Q06033 890 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 ZKSCAN8Q15776 578 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 GLE1Q53GS7 698 aaKnown RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 PWWP2AQ96N64 755 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 RMDN3Q96TC7 470 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 TEX13BQ9BXU2 312 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 SEL1LQ9UBV2 794 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 DBR1Q9UK59 544 aaKnown RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 PGRMC1O00264 195 aaKnown RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 DNM1LO00429 736 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 NR3C1P04150 777 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 FGFR4P22455 802 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 GALCP54803 685 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 MTMR1Q13613 665 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 NFIL3Q16649 462 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 MICALCLQ6ZW33 695 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 ANKRD42Q8N9B4 389 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 WHAMMQ8TF30 809 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 GPRASP2Q96D09 838 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms