RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TAF2Q6P1X5 1199 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 PHOSPHO2Q8TCD6 241 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 LARP4BQ92615 738 aaKnown RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.39□□□□□ -1.553e-7■■■■□ 21.8
SCAF11-212ENST00000549162 SENP6Q9GZR1 1112 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 NAT10Q9H0A0 1025 aaKnown RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ERVK-5Q9HDB9 667 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHAC2Q9Y5I4 1007 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CACNA1IQ9P0X4 2223 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC189A1A4V9 331 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 GOLGA6L9A6NEM1 432 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 M0QZQ0 153 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 PTENP60484 403 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 HTRA4P83105 476 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 FOXD4L6Q3SYB3 417 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 MUM1L1Q5H9M0 696 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 DRICH1Q6PGQ1 229 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 FOXD4L3Q6VB84 417 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 RNF207Q6ZRF8 634 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 STXBP4Q6ZWJ1 553 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 C12orf50Q8NA57 414 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SAMD11Q96NU1 681 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 EIF2AK1Q9BQI3 630 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SPC25Q9HBM1 224 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SRA1Q9HD15 236 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 XPNPEP1Q9NQW7 623 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHB9Q9Y5E1 797 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 V9GY48 417 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF638Q14966 1978 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 KIF2AO00139 706 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 TGFB1I1O43294 461 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 DNAJC6O75061 913 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 LSM8O95777 96 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 MAGEA6P43360 314 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CPT1AP50416 773 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 NDUFA8P51970 172 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 TNFAIP2Q03169 654 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 PDE12Q6L8Q7 609 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 JAMLQ86YT9 394 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 BAP1Q92560 729 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 DPF3Q92784 378 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 RNPC3Q96LT9 517 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CPSF3Q9UKF6 684 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CHMP3Q9Y3E7 222 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 PLXNB3Q9ULL4 1909 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CYP2D7A0A087X1C5 515 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 EOMESO95936 686 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 NR3C2P08235 984 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC192P0DO97 292 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 HOXC13P31276 330 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 ARHGAP25P42331 645 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SERINC3Q13530 473 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SLC30A10Q6XR72 485 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 RETREG3Q86VR2 466 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 WDR49Q8IV35 697 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 MICALL1Q8N3F8 863 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SLC44A5Q8NCS7 719 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 PSPC1Q8WXF1 523 aaKnown RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 NT5C3BQ969T7 300 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC85AQ96PX6 553 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SLC26A6Q9BXS9 759 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 LMAN2LQ9H0V9 348 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 L2HGDHQ9H9P8 463 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 KCNH7Q9NS40 1196 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 INTS13Q9NVM9 706 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 SRRDQ9UH36 339 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 IRAK3Q9Y616 596 aa5.38□□□□□ -1.55
SCAF11-212ENST00000549162 ADCY3O60266 1144 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 MED24O75448 989 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PAEPP09466 180 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 GZMAP12544 262 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 UBA1P22314 1058 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CTNNA2P26232 953 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 TUBP50607 506 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PLCB3Q01970 1234 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 MBTD1Q05BQ5 628 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PKP1Q13835 747 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 BTG3Q14201 252 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PLCB4Q15147 1175 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 ZC3H12AQ5D1E8 599 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PLA2G4FQ68DD2 849 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 DESI1Q6ICB0 168 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PDXDC1Q6P996 788 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 OTUD6AQ7L8S5 288 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 KIAA0825Q8IV33 1275 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PIP4P2Q8N4L2 257 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RNF10Q8N5U6 811 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 KCTD13Q8WZ19 329 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PAWRQ96IZ0 340 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 MRM3Q9HC36 420 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CSNK1G1Q9HCP0 422 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RNF146Q9NTX7 359 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 STXBP5LQ9Y2K9 1186 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 SMIM22K7EJ46 135 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 IGF2BP3O00425 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 FAM13AO94988 1023 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms