RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 WDR18Q9BV38 432 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 UBE2TQ9NPD8 197 aaPredicted RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 HOMER3Q9NSC5 361 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 SMIM23A6NLE4 172 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 VIMP08670 466 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 BMP3P12645 472 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 CRKP46108 304 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 MARCKSL1P49006 195 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 PDE6CP51160 858 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 CNGA2Q16280 664 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 HIBCHQ6NVY1 386 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SLC13A5Q86YT5 568 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 EPS8L3Q8TE67 593 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 MRIQ9BWK5 157 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 USP20Q9Y2K6 914 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 DDTLA6NHG4 134 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SNX3O60493 162 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 OAS1P00973 400 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 PYGMP11217 842 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 FGFR4P22455 802 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 ALCAMQ13740 583 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SIX1Q15475 284 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 EXOC3L1Q86VI1 746 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 C12orf56Q8IXR9 622 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 CCDC105Q8IYK2 499 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 LRRC19Q9H756 370 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 TMEM206Q9H813 350 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 NOD2Q9HC29 1040 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 SYNPO2Q9UMS6 1093 aa10.62□□□□□ -0.71
SMARCD1-205ENST00000548573 LOXHD1Q8IVV2 1947 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 EMSYQ7Z589 1322 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ZBTB39O15060 712 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 MAPK13O15264 365 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 PMM2O15305 246 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 CHMP2AO43633 222 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 KIF1CO43896 1103 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 GAS7O60861 476 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ATP5DP30049 168 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 VAMP7P51809 220 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 MESDQ14696 234 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ABCB5Q2M3G0 1257 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ARHGEF19Q8IW93 802 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 CCHCR1Q8TD31 782 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 SERPINB12Q96P63 405 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 VEZTQ9HBM0 779 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 KCNQ5Q9NR82 932 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 WHRNQ9P202 907 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 TMEM110-MUSTN1A8MSY1 372 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ECEL1O95672 775 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 CYP1A2P05177 515 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 RARAP10276 462 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 SLCO1A2P46721 670 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 DLG4P78352 724 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 TCP10Q12799 353 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 CALCOCO2Q13137 446 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 ZNF268Q14587 947 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 UBAP2Q5T6F2 1119 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 MIGA2Q7L4E1 593 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 RDH13Q8NBN7 331 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 N4BP2L2Q92802 583 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 PCDHB18PQ96TA0 734 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 WRAP73Q9P2S5 460 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 UVRAGQ9P2Y5 699 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 NOCTQ9UK39 431 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 DBR1Q9UK59 544 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-205ENST00000548573 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 UBR3Q6ZT12 1888 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 ARHGEF35A5YM69 484 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 ANKRD63C9JTQ0 380 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 SPOPO43791 374 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 HIP1RO75146 1068 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 CHRNB2P17787 502 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 RWDD2BP57060 319 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 PPP3CAQ08209 521 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 E2F5Q15329 346 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
SMARCD1-205ENST00000548573 TLDC1Q6P9B6 456 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms