RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 SMIM24O75264 130 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 LUC7L3O95232 432 aaKnown RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 COMTP21964 271 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 MAPK7Q13164 816 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 QPCTQ16769 361 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 EEPD1Q7L9B9 569 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 YTHDF3Q7Z739 585 aaKnown RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 POMGNT1Q8WZA1 660 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 PAGR1Q9BTK6 254 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 FAM129AQ9BZQ8 928 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 VCXQ9H320 206 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 C1orf112Q9NSG2 853 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 L3MBTL1Q9Y468 752 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 DDX3XO00571 662 aaKnown RBP eCLIP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 SPAG7O75391 227 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 FGRP09769 529 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 SMARCA1P28370 1054 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 EPM2AIP1Q7L775 607 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 C3orf20Q8ND61 904 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 C9orf72Q96LT7 481 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 LBHD1Q9BQE6 289 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 PICK1Q9NRD5 415 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 PITPNM2Q9BZ72 1349 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 NHSL1Q5SYE7 1610 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 FOXN3O00409 490 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 CYP26A1O43174 497 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 EYA4O95677 639 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 PDHA1P08559 390 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 RPA1P27694 616 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 STAT2P52630 851 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 KRT17Q04695 432 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 DALRD3Q5D0E6 543 aaKnown RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 PALM2Q8IXS6 379 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 BBOF1Q8ND07 529 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 DNAJC19Q96DA6 116 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 IWS1Q96ST2 819 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 RIOX1Q9H6W3 641 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 TTC7AQ9ULT0 858 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 ARL2BPQ9Y2Y0 163 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 OPLAHO14841 1288 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 MAPK13O15264 365 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 NDUFB10O96000 172 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 EIF2AK2P19525 551 aaKnown RBP10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 ANXA13P27216 316 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 MAN1A1P33908 653 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 RHBDL3P58872 404 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 BFSP1Q12934 665 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 GIT2Q14161 759 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 NT5DC3Q86UY8 548 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 CTAGE3PQ8IX95 158 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 SLC30A5Q8TAD4 765 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 SAYSD1Q9NPB0 183 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 UBOX5O94941 541 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 ANP32DO95626 131 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 VAMP7P51809 220 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 CAPRIN2Q6IMN6 1127 aaKnown RBP10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 CCDC89Q8N998 374 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 CHURC1Q8WUH1 139 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 SAAL1Q96ER3 474 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 LRRC37BQ96QE4 947 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 FGFBP2Q9BYJ0 223 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 WDR11Q9BZH6 1224 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.15□□□□□ -0.78
CALCOCO1-210ENST00000548263 SKAP2O75563 359 aaPredicted RBP10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 CASP5P51878 434 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 PEX3P56589 373 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 SYT2Q8N9I0 419 aaPredicted RBP10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 XXYLT1Q8NBI6 393 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 TATDN2Q93075 761 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 STAMBPL1Q96FJ0 436 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 BTBD6Q96KE9 485 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 FAM118BQ9BPY3 351 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 TMEM206Q9H813 350 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 INTUQ9ULD6 942 aa10.15□□□□□ -0.79
CALCOCO1-210ENST00000548263 CCDC160A6NGH7 325 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 DCDC2CA8MYV0 355 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 SLC16A3O15427 465 aaKnown RBP10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 NOL4O94818 638 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 SHBGP04278 402 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 SPP2Q13103 211 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 TMEM119Q4V9L6 283 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 STRIP1Q5VSL9 837 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 RUSC1Q9BVN2 902 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 MRPL11Q9Y3B7 192 aaKnown RBP10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 COL1A1P02452 1464 aaPredicted RBP10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 TAF1P21675 1872 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 HNRNPDLO14979 420 aaKnown RBP10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 LCA5LO95447 670 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 BAG2O95816 211 aa10.14□□□□□ -0.79
CALCOCO1-210ENST00000548263 PTENP60484 403 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms