RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC25A3Q00325 362 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
SCAF11-210ENST00000547654 MLC1Q15049 377 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 UNQ6494/PRO21346Q6UXR6 183 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 Q6ZRM9 215 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 TTC8Q8TAM2 541 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 HOOK2Q96ED9 719 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 ZNF180Q9UJW8 692 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 TNFRSF18Q9Y5U5 241 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 C2orf78A6NCI8 922 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 ELL2O00472 640 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 LMO1P25800 156 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 ADCY7P51828 1080 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 ATP2C1P98194 919 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 SLC6A3Q01959 620 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 ZRSR2Q15696 482 aaKnown RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 VPS72Q15906 364 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 GFOD2Q3B7J2 385 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 FAM102BQ5T8I3 360 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 NXNQ6DKJ4 435 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 KLHDC10Q6PID8 442 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 Q6ZPA2 131 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 LYSMD2Q8IV50 215 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 GSPT2Q8IYD1 628 aaKnown RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 TCEAL8Q8IYN2 117 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 SMC1BQ8NDV3 1235 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 OR2W6PQ8NHA6 318 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 GCDHQ92947 438 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 VOPP1Q96AW1 172 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 SLC7A6OSQ96CW6 309 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 IFT22Q9H7X7 185 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 TRHDEQ9UKU6 1024 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 TMPRSS11EQ9UL52 423 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 APOBEC2Q9Y235 224 aaKnown RBP5.41□□□□□ -1.54
SCAF11-210ENST00000547654 SPEF1Q9Y4P9 236 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 PHLDB1Q86UU1 1377 aa5.41□□□□□ -1.54
SCAF11-210ENST00000547654 UNC13AQ9UPW8 1703 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 A0A0A6YYJ9 748 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 HIP1RO75146 1068 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 H2AFYO75367 372 aaKnown RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 U2AF1L5P0DN76 240 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 PAX3P23760 479 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 U2AF1Q01081 240 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 SART3Q15020 963 aaKnown RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 ELAVL1Q15717 326 aaKnown RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 CFAP100Q494V2 611 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 UBE2R2Q712K3 238 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 SLC41A1Q8IVJ1 513 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 NXPE1Q8N323 547 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 OR5AN1Q8NGI8 311 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 ERCC4Q92889 916 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 CAMKK2Q96RR4 588 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 GPR87Q9BY21 358 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 ZNF700Q9H0M5 742 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-210ENST00000547654 SLC6A15Q9H2J7 730 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 GPRC5BQ9NZH0 403 aa5.4□□□□□ -1.54
SCAF11-210ENST00000547654 CCDC180Q9P1Z9 1646 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 FAM20BO75063 409 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 KRT37O76014 449 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 FOSP01100 380 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 COL10A1Q03692 680 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 TOB2Q14106 344 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 LRRC32Q14392 662 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 DHX8Q14562 1220 aaKnown RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 LHFPL2Q6ZUX7 228 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 GAREM2Q75VX8 874 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 CLEC14AQ86T13 490 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 SYNE4Q8N205 404 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 SLC25A43Q8WUT9 341 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 CHTF18Q8WVB6 975 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 HAS1Q92839 578 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 GFM2Q969S9 779 aaKnown RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 IL17RAQ96F46 866 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 ZNF496Q96IT1 587 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 RPL10LQ96L21 214 aaKnown RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 GPHA2Q96T91 129 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 RTFDC1Q9BY42 306 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 DENND2AQ9ULE3 1009 aa5.39□□□□□ -1.55
SCAF11-210ENST00000547654 RBM8AQ9Y5S9 174 aaKnown RBP5.39□□□□□ -1.55
SCAF11-210ENST00000547654 H7C1D1 291 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 IFRD1O00458 451 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-210ENST00000547654 ZEB2O60315 1214 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 PPFIA4O75335 1185 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 NUDT3O95989 172 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
SCAF11-210ENST00000547654 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-210ENST00000547654 SCNN1BP51168 640 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 BPIFB4P59827 614 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 PHC1P78364 1004 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 TCIRG1Q13488 830 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 ACAP1Q15027 740 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms