RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 RASSF8Q8NHQ8 419 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 TMEM169Q96HH4 297 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 CCSER1Q9C0I3 900 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 NRDE2Q9H7Z3 1164 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
DDX54-204ENST00000546898 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
DDX54-204ENST00000546898 FSCN2O14926 492 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 CSPG5O95196 566 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 PBX3P40426 434 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 NPTX2P47972 431 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 PEX3P56589 373 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 HYAL1Q12794 435 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 TMEM132AQ24JP5 1023 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 PLIN2Q99541 437 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 ADPGKQ9BRR6 497 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 KIFC3Q9BVG8 833 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.4
DDX54-204ENST00000546898 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 POLD4Q9HCU8 107 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 ARHGAP28Q9P2N2 729 aa17.52■□□□□ 0.4
DDX54-204ENST00000546898 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.4
DDX54-204ENST00000546898 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.4
DDX54-204ENST00000546898 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 K7ERI5 159 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 VCANP13611 3396 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 PLCG1P19174 1290 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 KCNA5P22460 613 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 KARSQ15046 597 aaKnown RBP17.51■□□□□ 0.39
DDX54-204ENST00000546898 CTC1Q2NKJ3 1217 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 LEXMQ3ZCV2 418 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 APBB1IPQ7Z5R6 666 aaPredicted RBP17.51■□□□□ 0.39
DDX54-204ENST00000546898 CDR2LQ86X02 465 aaPredicted RBP17.51■□□□□ 0.39
DDX54-204ENST00000546898 SPIRE2Q8WWL2 714 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 FAM193BQ96PV7 902 aaPredicted RBP17.51■□□□□ 0.39
DDX54-204ENST00000546898 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 TMEM134Q9H6X4 195 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
DDX54-204ENST00000546898 KMT5AQ9NQR1 393 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 CLDND1Q9NY35 253 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 STK39Q9UEW8 545 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 ODF2LQ9ULJ1 636 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 HES2Q9Y543 173 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 TRIP11Q15643 1979 aa17.51■□□□□ 0.39
DDX54-204ENST00000546898 CITO14578 2027 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 ARL5CA6NH57 179 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 EDN1P05305 212 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 GALTP07902 379 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 BMP1P13497 986 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 PLS3P13797 630 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 LIG1P18858 919 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 TXLNAP40222 546 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 MLH1P40692 756 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 KCNQ1P51787 676 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 ERVFC1P60507 584 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 DCAF4L1Q3SXM0 396 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 ADGRD2Q7Z7M1 963 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 RAD54LQ92698 747 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 IGSF21Q96ID5 467 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 GAD1Q99259 594 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 CDCA3Q99618 268 aaPredicted RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 TCF25Q9BQ70 676 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 NTPCRQ9BSD7 190 aaKnown RBP17.5■□□□□ 0.39
DDX54-204ENST00000546898 APOL6Q9BWW8 343 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 GBP3Q9H0R5 595 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 ENTPD7Q9NQZ7 604 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 BLOC1S4Q9NUP1 217 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 DNAJB4Q9UDY4 337 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
DDX54-204ENST00000546898 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 TTLL13PA6NNM8 815 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 DDHD2O94830 711 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 POMCP01189 267 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 SLC11A1P49279 550 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 SMTNP53814 917 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 BMS1Q14692 1282 aaKnown RBP17.49■□□□□ 0.39
DDX54-204ENST00000546898 PUS10Q3MIT2 529 aaKnown RBP17.49■□□□□ 0.39
DDX54-204ENST00000546898 ATF7IP2Q5U623 682 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 GPBP1Q86WP2 473 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 ZNF280BQ86YH2 543 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 EFHBQ8N7U6 833 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 KRI1Q8N9T8 703 aaKnown RBP17.49■□□□□ 0.39
DDX54-204ENST00000546898 ADAMTS19Q8TE59 1207 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 LARP4BQ92615 738 aaKnown RBP17.49■□□□□ 0.39
DDX54-204ENST00000546898 LARSQ9P2J5 1176 aaKnown RBP17.49■□□□□ 0.39
DDX54-204ENST00000546898 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 TNFSF13BQ9Y275 285 aa17.49■□□□□ 0.39
DDX54-204ENST00000546898 BDP1A6H8Y1 2624 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 H0YCG3 227 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 B4GALT3O60512 393 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms