RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 VAV2P52735 878 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 CELF3Q5SZQ8 465 aaKnown RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 LLGL2Q6P1M3 1020 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 METTL7BQ6UX53 244 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 INO80BQ9C086 356 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 METTL14Q9HCE5 456 aaKnown RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 CYP26A1O43174 497 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 PALMO75781 387 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 CYP2B6P20813 491 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 EDNRBP24530 442 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 BIRC3Q13489 604 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 PLCB4Q15147 1175 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ZNF394Q53GI3 561 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 FIGNQ5HY92 759 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 SLC47A2Q86VL8 602 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 NPLOC4Q8TAT6 608 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 GPR88Q9GZN0 384 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
CCDC38-202ENST00000546386 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ZBTB42B2RXF5 422 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 F8VZ95 297 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 NEDD9Q14511 834 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ADAT2Q7Z6V5 191 aaKnown RBP12.98□□□□□ -0.33
CCDC38-202ENST00000546386 GSPT2Q8IYD1 628 aaKnown RBP12.98□□□□□ -0.33
CCDC38-202ENST00000546386 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
CCDC38-202ENST00000546386 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 DDX3XO00571 662 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SGPL1O95470 568 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 CETPP11597 493 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 MXI1P50539 228 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 TERF1P54274 439 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 EFCAB12Q6NXP0 572 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 XRRA1Q6P2D8 792 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 CPNE8Q86YQ8 564 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 NFASCO94856 1347 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 TMEM110-MUSTN1A8MSY1 372 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SLC16A3O15427 465 aaKnown RBP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 TADA3O75528 432 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SLC25A27O95847 323 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 KRT5P13647 590 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 STRN3Q13033 797 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 ORC1Q13415 861 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 DAB2IPQ5VWQ8 1189 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 OR5B17Q8NGF7 314 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 PARD3BQ8TEW8 1205 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 DHX33Q9H6R0 707 aaKnown RBP12.97□□□□□ -0.33
CCDC38-202ENST00000546386 FLRT1Q9NZU1 646 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 APEX2Q9UBZ4 518 aa12.97□□□□□ -0.33
CCDC38-202ENST00000546386 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.33
CCDC38-202ENST00000546386 INSRRP14616 1297 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 MUTP22033 750 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
CCDC38-202ENST00000546386 BEX3Q00994 111 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 SLC7A5Q01650 507 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 SLC18A3Q16572 532 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 BTBD6Q96KE9 485 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 SCLT1Q96NL6 688 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 FAM49AQ9H0Q0 323 aaPredicted RBP12.96□□□□□ -0.33
CCDC38-202ENST00000546386 ZNF446Q9NWS9 450 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 NAGPAQ9UK23 515 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 UMODL1Q5DID0 1318 aa12.96□□□□□ -0.33
CCDC38-202ENST00000546386 SLC26A4O43511 780 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 ATG7O95352 703 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 CFHP08603 1231 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 GTF2A2P52657 109 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 PASD1Q8IV76 773 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 CEP89Q96ST8 783 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 PNKPQ96T60 521 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms