RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 MREGQ8N565 214 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 GRAPLQ8TC17 118 aaPredicted RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 PIGOQ8TEQ8 1089 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 HAS1Q92839 578 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 GJA10Q969M2 543 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TEKT1Q969V4 418 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 NUB1Q9Y5A7 615 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 GNPATO15228 680 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 BUB1O43683 1085 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 PAEPP09466 180 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SNHG28P0DPA3 235 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SERPINB3P29508 390 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TMEM53Q6P2H8 277 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TMC4Q7Z404 712 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 PIGWQ7Z7B1 504 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TTC8Q8TAM2 541 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 MGARPQ8TDB4 240 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 INIPQ9NRY2 104 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 INTS9Q9NV88 658 aaKnown RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 NMRK1Q9NWW6 199 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 PCDHA2Q9Y5H9 948 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SIPA1L1O43166 1804 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 SSU72P8A0A1W2PR75 194 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 TMEM247A6NEH6 219 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 A6NJR5 290 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 P4HA2O15460 535 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ASAP2O43150 1006 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 AKR1B10O60218 316 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 PEX11AO75192 247 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ENTPD5O75356 428 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 HSPA9P38646 679 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 GALK1P51570 392 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ZNF131P52739 623 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 GPSM2P81274 684 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CFAP221Q4G0U5 840 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 SMUG1Q53HV7 270 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 GRAMD4Q6IC98 578 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ZNF554Q86TJ5 538 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 SPATA16Q9BXB7 569 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 TAOK3Q9H2K8 898 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 UTP6Q9NYH9 597 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 A0A0J9YVX5 310 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 H0YGN5 161 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 hCG_1984214I3L0E3 225 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CYP1A1P04798 512 aaPredicted RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 ITGA2BP08514 1039 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 SKIP12755 728 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 IL1R1P14778 569 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 GM2AP17900 193 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 FLT3P36888 993 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 MAGEA1P43355 309 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 COASYQ13057 564 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR1-202ENST00000546274 ZNF804AQ7Z570 1209 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ZNF713Q8N859 430 aaPredicted RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 C1orf131Q8NDD1 294 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 SLC16A10Q8TF71 515 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 EDEM3Q9BZQ6 932 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ZNF287Q9HBT7 754 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 NFS1Q9Y697 457 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 IGKV6D-41A0A0C4DH26 115 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 EIF3FO00303 357 aaPredicted RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 RAD51CO43502 376 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 TJP3O95049 919 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 ADCY7P51828 1080 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 BNIP1Q12981 228 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 PLS1Q14651 629 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 R3HDM1Q15032 1099 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 LRRC14Q15048 493 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CFAP157Q5JU67 520 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 RBBP8NLQ8NC74 664 aaPredicted RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 AKT1S1Q96B36 256 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 PBKQ96KB5 322 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 TMEM237Q96Q45 408 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 TCHPQ9BT92 498 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 NSRP1Q9H0G5 558 aaKnown RBP8.44□□□□□ -1.06
UBR1-202ENST00000546274 CD209Q9NNX6 404 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 RIC8AQ9NPQ8 531 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 FAM114A2Q9NRY5 505 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 FGFR1OP2Q9NVK5 253 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CYP39A1Q9NYL5 469 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 CEP72Q9P209 647 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 GAKO14976 1311 aa8.44□□□□□ -1.06
UBR1-202ENST00000546274 SART1O43290 800 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 LDHCP07864 332 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 LSAMPQ13449 338 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 MAP7Q14244 749 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 UBE2SQ16763 222 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 DPY19L2P1Q6NXN4 242 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms