RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SLC25A43Q8WUT9 341 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-224ENST00000545688 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
SNHG1-224ENST00000545688 KCTD10Q9H3F6 313 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 IFT22Q9H7X7 185 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 TOPORSQ9NS56 1045 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-224ENST00000545688 SORCS3Q9UPU3 1222 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 CDY2AQ9Y6F7 541 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 PRAMEF4O60810 478 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 DNAJC6O75061 913 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 TMEM127O75204 238 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 NR4A1P22736 598 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 GZMKP49863 264 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 INHBCP55103 352 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 LGALS4P56470 323 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 STRN3Q13033 797 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 STRA8Q7Z7C7 330 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 CEP89Q96ST8 783 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
SNHG1-224ENST00000545688 A0A087X1B8 175 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-224ENST00000545688 TLDC2A0PJX2 215 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 GYPEP15421 78 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 KRT4P19013 534 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 PTGS2P35354 604 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 TAF7LQ5H9L4 462 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 Q6ZPA2 131 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
SNHG1-224ENST00000545688 DOK3Q7L591 496 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 MRGPREQ86SM8 312 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 FAM83AQ86UY5 434 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 XYLT1Q86Y38 959 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 GLB1L3Q8NCI6 653 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-224ENST00000545688 CPT1CQ8TCG5 803 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 EAF2Q96CJ1 260 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-224ENST00000545688 TTC1Q99614 292 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 EDARQ9UNE0 448 aa6.7□□□□□ -1.34
SNHG1-224ENST00000545688 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNHG1-224ENST00000545688 ZEB2O60315 1214 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 SESN3P58005 492 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 MEF2AQ02078 507 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-224ENST00000545688 VPS72Q15906 364 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 METTL24Q5JXM2 366 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 LILRA3Q8N6C8 439 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-224ENST00000545688 HAS1Q92839 578 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 HDAC5Q9UQL6 1122 aa6.69□□□□□ -1.34
SNHG1-224ENST00000545688 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
SNHG1-224ENST00000545688 OVOL3O00110 214 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 TRIM24O15164 1050 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 ULK1O75385 1050 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 SCAF4O95104 1147 aaKnown RBP6.68□□□□□ -1.34
SNHG1-224ENST00000545688 APBA1Q02410 837 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 UGT8Q16880 541 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 GIMAP6Q6P9H5 292 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 RHOUQ7L0Q8 258 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 ULK2Q8IYT8 1036 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 RPUSD2Q8IZ73 545 aaKnown RBP6.68□□□□□ -1.34
SNHG1-224ENST00000545688 SNX33Q8WV41 574 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 LENG9Q96B70 501 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 EIF2B4Q9UI10 523 aaKnown RBP6.68□□□□□ -1.34
SNHG1-224ENST00000545688 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
SNHG1-224ENST00000545688 CTSSP25774 331 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 ZFP36P26651 326 aaKnown RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 APOBEC3AP31941 199 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 FSCN1Q16658 493 aaKnown RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 C19orf54Q5BKX5 351 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 PCSK4Q6UW60 755 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 GPRIN1Q7Z2K8 1008 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 MRGPRGQ86SM5 289 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 CDC5LQ99459 802 aaKnown RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 PRRX2Q99811 253 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 NDC1Q9BTX1 674 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 TTPALQ9BTX7 342 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 ZNF768Q9H5H4 540 aaKnown RBP6.67□□□□□ -1.34
SNHG1-224ENST00000545688 CAAP1Q9H8G2 361 aa6.67□□□□□ -1.34
SNHG1-224ENST00000545688 AHRRA9YTQ3 701 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 ITGA10O75578 1167 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 RECQL4O94761 1208 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 HSP90B1P14625 803 aaKnown RBP6.66□□□□□ -1.34
SNHG1-224ENST00000545688 ENPP1P22413 925 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 HSD3B2P26439 372 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 CSRP2Q16527 193 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■■■ 41.6
SNHG1-224ENST00000545688 ANKS6Q68DC2 871 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 SYNE4Q8N205 404 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 MDM1Q8TC05 714 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 ACAP3Q96P50 834 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 KCNH6Q9H252 994 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 SLKQ9H2G2 1235 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-224ENST00000545688 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 DPP7Q9UHL4 492 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 FZD1Q9UP38 647 aa6.66□□□□□ -1.34
SNHG1-224ENST00000545688 TMA7Q9Y2S6 64 aaKnown RBP6.66□□□□□ -1.34
SNHG1-224ENST00000545688 PRR5-ARHGAP8B1AHC4 643 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 LEFTY2O00292 366 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 RAMP2O60895 175 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms