RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 SLC5A5Q92911 643 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 MIEF2Q96C03 454 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 RSRC1Q96IZ7 334 aaKnown RBP9.41□□□□□ -0.9
TDP1-204ENST00000545686 NACC1Q96RE7 527 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 PLVAPQ9BX97 442 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 MOV10L1Q9BXT6 1211 aaKnown RBP9.41□□□□□ -0.9
TDP1-204ENST00000545686 LRRC19Q9H756 370 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 DNAJC18Q9H819 358 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 SUFUQ9UMX1 484 aa9.41□□□□□ -0.9
TDP1-204ENST00000545686 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.41□□□□□ -0.9
TDP1-204ENST00000545686 ZNF536O15090 1300 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 SMIM23A6NLE4 172 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 SFI1A8K8P3 1242 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 MAPK13O15264 365 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 EXOC3O60645 756 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 LRRN2O75325 713 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 PSMD10O75832 226 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 ECEL1O95672 775 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
TDP1-204ENST00000545686 COMTP21964 271 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 MAN1A1P33908 653 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 MARCKSL1P49006 195 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 PRELPP51888 382 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 E2F5Q15329 346 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 SIX1Q15475 284 aaPredicted RBP9.4□□□□□ -0.9
TDP1-204ENST00000545686 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
TDP1-204ENST00000545686 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 TMEM179Q6ZVK1 233 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 EXOC3L1Q86VI1 746 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 CCDC105Q8IYK2 499 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 MAB21L3Q8N8X9 362 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 SLC20A1Q8WUM9 679 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 TEKT1Q969V4 418 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 BAIAP2L1Q9UHR4 511 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
TDP1-204ENST00000545686 UBAP1LF5GYI3 381 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 TCEA3O75764 348 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 GJB6O95452 261 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 NQO1P15559 274 aaKnown RBP9.4□□□□□ -0.91
TDP1-204ENST00000545686 POLD1P28340 1107 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 NCALDP61601 193 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 CAV1Q03135 178 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 LMNB2Q03252 620 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 ICA1Q05084 483 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 CERKLQ49MI3 558 aaPredicted RBP9.4□□□□□ -0.91
TDP1-204ENST00000545686 EPC2Q52LR7 807 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 AADACL2Q6P093 401 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 MIGA2Q7L4E1 593 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.91
TDP1-204ENST00000545686 ZDHHC14Q8IZN3 488 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 PIGOQ8TEQ8 1089 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 DYDC1Q8WWB3 177 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 DYDC2Q96IM9 177 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 IFT74Q96LB3 600 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 WDR11Q9BZH6 1224 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 BATF3Q9NR55 127 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 ABCF3Q9NUQ8 709 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.91
TDP1-204ENST00000545686 WDR81Q562E7 1941 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 UBOX5O94941 541 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 CYP1A2P05177 515 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 RARAP10276 462 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 SKIV2L2P42285 1042 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 RWDD2BP57060 319 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 BNIP1Q12981 228 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 USH1GQ495M9 461 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 APOBEC3HQ6NTF7 200 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 TATDN1Q6P1N9 297 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 RHBDF2Q6PJF5 856 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 MAIP1Q8WWC4 291 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 TCP11Q8WWU5 503 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 IKZF4Q9H2S9 585 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 CDC42EP4Q9H3Q1 356 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 TMEM206Q9H813 350 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 UBE2TQ9NPD8 197 aaPredicted RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 NOCTQ9UK39 431 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 GTF3C4Q9UKN8 822 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 C15orf41Q9Y2V0 281 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 ARL2BPQ9Y2Y0 163 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 TMEM110-MUSTN1A8MSY1 372 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 F5H6K3 240 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 RAD21O60216 631 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 CLTAP09496 248 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 PYGMP11217 842 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 ITIH2P19823 946 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 GBP2P32456 591 aaPredicted RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 IFNAR2P48551 515 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 CLNS1AP54105 237 aaKnown RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
TDP1-204ENST00000545686 COPS2P61201 443 aa9.39□□□□□ -0.91
TDP1-204ENST00000545686 SNRPFP62306 86 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms