RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CACNA2D2Q9NY47 1150 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 HECW1Q76N89 1606 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 PLEKHG2Q9H7P9 1386 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 CDHR2Q9BYE9 1310 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 FAM47DPA6NHR8 397 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 PRLP01236 227 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 DMP1Q13316 513 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-216ENST00000545170 CLEC4GQ6UXB4 293 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 DENND6AQ8IWF6 608 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 ZCCHC7Q8N3Z6 543 aaKnown RBP9.12□□□□□ -0.95
ATXN3-216ENST00000545170 FAM162AQ96A26 154 aa9.12□□□□□ -0.95
ATXN3-216ENST00000545170 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
ATXN3-216ENST00000545170 TMEM120BA0PK00 339 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ALOX12P18054 663 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SMAD1Q15797 465 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 FOXP1Q9H334 677 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 APPL1Q9UKG1 709 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF532Q9HCE3 1301 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 PEX5P50542 639 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CCZ1BP86790 482 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CCZ1P86791 482 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 MTF1Q14872 753 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 IZUMO3Q5VZ72 239 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CEP44Q9C0F1 390 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 KIAA1024Q9UPX6 916 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ARHGEF37A1IGU5 675 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 MIF4GDA9UHW6 222 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ABL1P00519 1130 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 VIL1P09327 827 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CACNB1Q02641 598 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 LAMC2Q13753 1193 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 UTS2BQ765I0 119 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 IFNL2Q8IZJ0 200 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SCG3Q8WXD2 468 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SENP1Q9P0U3 644 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CEP72Q9P209 647 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 DDAH1O94760 285 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 FAM58BPP0C7Q3 252 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 NR5A1Q13285 461 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SLC39A6Q13433 755 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 CDC37Q16543 378 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 E4F1Q66K89 784 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SCUBE1Q8IWY4 988 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 NSUN7Q8NE18 718 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ZSCAN10Q96SZ4 725 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TINF2Q9BSI4 451 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 HDHD2Q9H0R4 259 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 DENND2AQ9ULE3 1009 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 EFCAB5A4FU69 1503 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 UHRF1BP1Q6BDS2 1440 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TNFRSF21O75509 655 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 LBRQ14739 615 aaKnown RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 RGS21Q2M5E4 152 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 PPP1R2P3Q6NXS1 205 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 C4orf33Q8N1A6 199 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TTC8Q8TAM2 541 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 B3GALT6Q96L58 329 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 OSBPL10Q9BXB5 764 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ATP6V1HQ9UI12 483 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ANAPC7Q9UJX3 599 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 F5H423 210 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-216ENST00000545170 S100A1P23297 94 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 P3H2Q8IVL5 708 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 NLRP4Q96MN2 994 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 SH3GLB1Q9Y371 365 aa9.11□□□□□ -0.95
ATXN3-216ENST00000545170 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FAM25AB3EWG3 89 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FAM25CB3EWG5 89 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FAM25GB3EWG6 89 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CCNE1P24864 410 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PREPLQ4J6C6 727 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 TMEM110Q86TL2 294 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CLVS1Q8IUQ0 354 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 SYTL1Q8IYJ3 562 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 VPS39Q96JC1 886 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CFBP00751 764 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PTGS2P35354 604 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FAM45BPQ6NSW5 357 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CDYLQ9Y232 598 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 RBMX2Q9Y388 322 aaKnown RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 MED23Q9ULK4 1368 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 LGALS16A8MUM7 142 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms