RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	CDC25A	P30304	524 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	SLC11A1	P49279	550 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	AFF1	P51825	1210 aa	Known RBP	14.81	□□□□□ -0.04
POLE-222	ENST00000545015	RNASEL	Q05823	741 aa	Known RBP	14.81	□□□□□ -0.04
POLE-222	ENST00000545015	DSC1	Q08554	894 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	SMAD4	Q13485	552 aa	Known RBP	14.81	□□□□□ -0.04
POLE-222	ENST00000545015	SMAD2	Q15796	467 aa	Known RBP	14.81	□□□□□ -0.04
POLE-222	ENST00000545015	MAPK6	Q16659	721 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	LONRF3	Q496Y0	759 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	RINT1	Q6NUQ1	792 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	C1orf186	Q6ZWK4	172 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	KCNK18	Q7Z418	384 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	TMEM173	Q86WV6	379 aa	Predicted RBP	14.81	□□□□□ -0.04
POLE-222	ENST00000545015	ZNF280B	Q86YH2	543 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	HACE1	Q8IYU2	909 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	DAW1	Q8N136	415 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	DEPTOR	Q8TB45	409 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	IFT74	Q96LB3	600 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	PNMA5	Q96PV4	448 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	RNF39	Q9H2S5	420 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	IGFLR1	Q9H665	355 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	KCND2	Q9NZV8	630 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	CD207	Q9UJ71	328 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	INPP5F	Q9Y2H2	1132 aa		14.81	□□□□□ -0.04
POLE-222	ENST00000545015	VWA3A	A6NCI4	1184 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	ARL5C	A6NH57	179 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	NT5C1B-RDH14	C9J2C7	533 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	N4BP3	O15049	544 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	MBTPS2	O43462	519 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	DDHD2	O94830	711 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	EFEMP2	O95967	443 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	MAPK7	Q13164	816 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	GIT2	Q14161	759 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	SMC1A	Q14683	1233 aa	Known RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	TMEM119	Q4V9L6	283 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	TMC7	Q7Z402	723 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	COLGALT2	Q8IYK4	626 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	SYT2	Q8N9I0	419 aa	Predicted RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	SMRP1	Q8NCR6	262 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	GSTCD	Q8NEC7	633 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	BCL7C	Q8WUZ0	217 aa	Predicted RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	KCNN1	Q92952	543 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	SNX21	Q969T3	373 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	DRC1	Q96MC2	740 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	NTPCR	Q9BSD7	190 aa	Known RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	TRIM6	Q9C030	488 aa	Predicted RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	ZBP1	Q9H171	429 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	NXF3	Q9H4D5	531 aa	Known RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	PDZD7	Q9H5P4	517 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	ENTPD7	Q9NQZ7	604 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	DNAJB4	Q9UDY4	337 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	MORC2	Q9Y6X9	1032 aa	Predicted RBP	14.8	□□□□□ -0.04
POLE-222	ENST00000545015	PHLPP2	Q6ZVD8	1323 aa		14.8	□□□□□ -0.04
POLE-222	ENST00000545015	C2orf71	A6NGG8	1288 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	C19orf67	A6NJJ6	358 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	HIDE1	A8MVS5	230 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015		K7ELQ4	463 aa	Predicted RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	CSPG5	O95196	566 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	ALDH2	P05091	517 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	PRKCB	P05771	671 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	CTSA	P10619	480 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	SYT1	P21579	422 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	NDUFV1	P49821	464 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	PRPF4B	Q13523	1007 aa	Known RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	BMS1	Q14692	1282 aa	Known RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	PLPP4	Q5VZY2	271 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	EP400NL	Q6ZTU2	488 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	RBM23	Q86U06	439 aa	Known RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	RNF168	Q8IYW5	571 aa	Predicted RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	VN1R2	Q8NFZ6	395 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	GAD1	Q99259	594 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	RUSC1	Q9BVN2	902 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	TMEM134	Q9H6X4	195 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	ARHGAP28	Q9P2N2	729 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	TCF20	Q9UGU0	1960 aa	Known RBP	14.79	□□□□□ -0.04
POLE-222	ENST00000545015	HES2	Q9Y543	173 aa		14.79	□□□□□ -0.04
POLE-222	ENST00000545015	TTLL13P	A6NNM8	815 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	NRP1	O14786	923 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	PER2	O15055	1255 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	NPTXR	O95502	500 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	POMC	P01189	267 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	EDN1	P05305	212 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	LONP1	P36776	959 aa	Known RBP	14.78	□□□□□ -0.04
POLE-222	ENST00000545015	MLH1	P40692	756 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	SLC12A3	P55017	1021 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	REST	Q13127	1097 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	SF3A1	Q15459	793 aa	Known RBP	14.78	□□□□□ -0.04
POLE-222	ENST00000545015	ADHFE1	Q8IWW8	467 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	VPS52	Q8N1B4	723 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	SPIRE2	Q8WWL2	714 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	FAM193B	Q96PV7	902 aa	Predicted RBP	14.78	□□□□□ -0.04
POLE-222	ENST00000545015	VN1R3	Q9BXE9	311 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	CD320	Q9NPF0	282 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	MIOS	Q9NXC5	875 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	KCNG1	Q9UIX4	513 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	FAN1	Q9Y2M0	1017 aa		14.78	□□□□□ -0.04
POLE-222	ENST00000545015	RBM19	Q9Y4C8	960 aa	Known RBP	14.78	□□□□□ -0.04
POLE-222	ENST00000545015	VPS37C	A5D8V6	355 aa	Predicted RBP	14.77	□□□□□ -0.05
POLE-222	ENST00000545015	HIP1R	O75146	1068 aa		14.77	□□□□□ -0.05
POLE-222	ENST00000545015	SRGAP2B	P0DMP2	458 aa		14.77	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms