RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	MEIS3P2	A8K0S8	358 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382		K7ERI5	159 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	NR1I2	O75469	434 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	NPTXR	O95502	500 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	SRGAP2B	P0DMP2	458 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	SMTN	P53814	917 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	PEX3	P56589	373 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	HYAL1	Q12794	435 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	CAMK1	Q14012	370 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	LEXM	Q3ZCV2	418 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	TMEM119	Q4V9L6	283 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	C1orf186	Q6ZWK4	172 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	KCNK18	Q7Z418	384 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	SLC39A11	Q8N1S5	342 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	SMG8	Q8ND04	991 aa	Known RBP	13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	ADAMTS19	Q8TE59	1207 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	PNMA5	Q96PV4	448 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	RPS6KC1	Q96S38	1066 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	PLIN2	Q99541	437 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	TCF25	Q9BQ70	676 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	TMEM175	Q9BSA9	504 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	RUSC1	Q9BVN2	902 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	APOL6	Q9BWW8	343 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	GBP3	Q9H0R5	595 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	IGFLR1	Q9H665	355 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	NRDE2	Q9H7Z3	1164 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	TLE6	Q9H808	572 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	KMT5A	Q9NQR1	393 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	CLIC4	Q9Y696	253 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	MYH15	Q9Y2K3	1946 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	XIRP2	A4UGR9	3374 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382	NCOR1	O75376	2440 aa		13.93	□□□□□ -0.18
CLPB-213	ENST00000544382		H0YCG3	227 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	IRS1	P35568	1242 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	PBX3	P40426	434 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	MLH1	P40692	756 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	NPTX2	P47972	431 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	NDUFV1	P49821	464 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	KCNQ1	P51787	676 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	SMC1A	Q14683	1233 aa	Known RBP	13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	COL19A1	Q14993	1142 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	DCAF4L1	Q3SXM0	396 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	PLPP4	Q5VZY2	271 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	TMC7	Q7Z402	723 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	TMEM87A	Q8NBN3	555 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	ZNF396	Q96N95	335 aa	Predicted RBP	13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	UHRF1	Q96T88	793 aa	Predicted RBP	13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	KIFC3	Q9BVG8	833 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	CCDC113	Q9H0I3	377 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	NXF3	Q9H4D5	531 aa	Known RBP	13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	TMEM134	Q9H6X4	195 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	CCDC39	Q9UFE4	941 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	PARP2	Q9UGN5	583 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	HES2	Q9Y543	173 aa		13.92	□□□□□ -0.18
CLPB-213	ENST00000544382	ARL5C	A6NH57	179 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	FSCN2	O14926	492 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	INPPL1	O15357	1258 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	POMC	P01189	267 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	ALDH2	P05091	517 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	KRT18	P05783	430 aa	Known RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	GALT	P07902	379 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	BMP1	P13497	986 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	MARCKS	P29966	332 aa	Predicted RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	CA8	P35219	290 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	NRIP1	P48552	1158 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	SLC12A3	P55017	1021 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	CEBPZ	Q03701	1054 aa	Known RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	STRN3	Q13033	797 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	PTPA	Q15257	358 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	ATF7IP2	Q5U623	682 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	EFHB	Q8N7U6	833 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	IGSF21	Q96ID5	467 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	GAD1	Q99259	594 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	MRPL4	Q9BYD3	311 aa	Known RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	CCSER1	Q9C0I3	900 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	PDZD7	Q9H5P4	517 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	POLD4	Q9HCU8	107 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	LARS	Q9P2J5	1176 aa	Known RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	ODF2L	Q9ULJ1	636 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	FAN1	Q9Y2M0	1017 aa		13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	SRPRB	Q9Y5M8	271 aa	Known RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
CLPB-213	ENST00000544382	TTC28	Q96AY4	2481 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	NT5C1B-RDH14	C9J2C7	533 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382		H3BQ06	376 aa	Predicted RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	PLS3	P13797	630 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	PLCG1	P19174	1290 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	SCP2	P22307	547 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	SLC11A1	P49279	550 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	ERVFC1	P60507	584 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	RAD51AP2	Q09MP3	1159 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	GRIK3	Q13003	919 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	GIT2	Q14161	759 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	KARS	Q15046	597 aa	Known RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	STK38	Q15208	465 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	CTC1	Q2NKJ3	1217 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	DDX53	Q86TM3	631 aa	Known RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	RBM23	Q86U06	439 aa	Known RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	GPBP1	Q86WP2	473 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms