RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 IRAK1P51617 712 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 SETQ01105 290 aaPredicted RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 SNX1Q13596 522 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 TRIP13Q15645 432 aaPredicted RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 SNRNP35Q16560 246 aaKnown RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 SEPT14Q6ZU15 432 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 RIT2Q99578 217 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.04■□□□□ 0.324e-9■■□□□ 13.8
SNRNP70-203ENST00000544278 PXMP2Q9NR77 195 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 VIPAS39Q9H9C1 493 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 PIM2Q9P1W9 311 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 VWA5AO00534 786 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 CFHP08603 1231 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 TMOD1P28289 359 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 UAP1Q16222 522 aaPredicted RBP17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 NLRX1Q86UT6 975 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 ZDHHC14Q8IZN3 488 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 CAPS2Q9BXY5 557 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 BZW2Q9Y6E2 419 aaKnown RBP17.03■□□□□ 0.32
SNRNP70-203ENST00000544278 RGS20O76081 388 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 ECHS1P30084 290 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 PLTPP55058 493 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 MCTP2Q6DN12 878 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 PSMD1Q99460 953 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 TSKSQ9UJT2 592 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 FOXO6A8MYZ6 492 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 HSD17B3P37058 310 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 SLC39A4Q6P5W5 647 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 EMBQ6PCB8 327 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 CCDC25Q86WR0 208 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 RFFLQ8WZ73 363 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 PPP1R16BQ96T49 567 aa17.02■□□□□ 0.32
SNRNP70-203ENST00000544278 PFASO15067 1338 aa17.02■□□□□ 0.31
SNRNP70-203ENST00000544278 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.31
SNRNP70-203ENST00000544278 TRPM4Q8TD43 1214 aa17.02■□□□□ 0.31
SNRNP70-203ENST00000544278 PPANQ9NQ55 473 aaKnown RBP17.02■□□□□ 0.31
SNRNP70-203ENST00000544278 DOCK5Q9H7D0 1870 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 O00370 1275 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 WDR46O15213 610 aaKnown RBP17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 ZBED4O75132 1171 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 COMTP21964 271 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 MARK3P27448 753 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 CTNNA1P35221 906 aaKnown RBP17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 SLCO1A2P46721 670 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 CDR1P51861 262 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 SCFD2Q8WU76 684 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 CPA5Q8WXQ8 436 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 CHRNB2P17787 502 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 SP2Q02086 613 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 ZNF572Q7Z3I7 529 aaPredicted RBP17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 FAM83AQ86UY5 434 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 TAF1DQ9H5J8 278 aaPredicted RBP17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 KLHL11Q9NVR0 708 aa17.01■□□□□ 0.31
SNRNP70-203ENST00000544278 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
SNRNP70-203ENST00000544278 LMNB1P20700 586 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 SSR1P43307 286 aaKnown RBP17■□□□□ 0.31
SNRNP70-203ENST00000544278 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
SNRNP70-203ENST00000544278 PCNX4Q63HM2 1172 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 C10orf71Q711Q0 1435 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 TBX20Q9UMR3 447 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 SPOPO43791 374 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 MAGEA9P43362 315 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 PSEN1P49768 467 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 LIG3P49916 1009 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 MNAT1P51948 309 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
SNRNP70-203ENST00000544278 TMEM132BQ14DG7 1078 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 ZNF394Q53GI3 561 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 ODF2Q5BJF6 829 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 IQCKQ8N0W5 287 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 TMEM161BQ8NDZ6 487 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 ATG4AQ8WYN0 398 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 ZNF653Q96CK0 615 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 ZBTB48P10074 688 aaPredicted RBP17■□□□□ 0.31
SNRNP70-203ENST00000544278 PSMC5P62195 406 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 BIRC3Q13489 604 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 YY1AP1Q9H869 796 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 SEL1LQ9UBV2 794 aa17■□□□□ 0.31
SNRNP70-203ENST00000544278 LRRIQ4A6NIV6 560 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 BCRP11274 1271 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 DMP1Q13316 513 aaPredicted RBP16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 INTS8Q75QN2 995 aaKnown RBP16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 MDM1Q8TC05 714 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 C1orf54Q8WWF1 131 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 PWWP2AQ96N64 755 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
SNRNP70-203ENST00000544278 WDR64B1ANS9 1081 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms