RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 STK38LQ9Y2H1 464 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 CEP83Q9Y592 693 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
PRAME-214ENST00000543184 UBOX5O94941 541 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
PRAME-214ENST00000543184 EPHX2P34913 555 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 FKBP1AP62942 108 aaKnown RBP15.32■□□□□ 0.04
PRAME-214ENST00000543184 MESDQ14696 234 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 SEPT2Q15019 361 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 DONSONQ9NYP3 566 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 ALG6Q9Y672 507 aa15.32■□□□□ 0.04
PRAME-214ENST00000543184 FOXN3O00409 490 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 ACSL3O95573 720 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 TTLL1O95922 423 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 EZRP15311 586 aaKnown RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 SOX5P35711 763 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 JAG1P78504 1218 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SPIRE1Q08AE8 756 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 HYIQ5T013 277 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 MOB2Q70IA6 237 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 PHLDB2Q86SQ0 1253 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 MYCT1Q8N699 235 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SLC30A5Q8TAD4 765 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 MIEF2Q96C03 454 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 GPR88Q9GZN0 384 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 PABPC3Q9H361 631 aaKnown RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 GRHL1Q9NZI5 618 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 MGRN1O60291 552 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 CALCAP01258 141 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 RPS12P25398 132 aaKnown RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 PPATQ06203 517 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SNX1Q13596 522 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 TRIP13Q15645 432 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 ZC3H3Q8IXZ2 948 aaKnown RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SPICE1Q8N0Z3 855 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SEC14L1Q92503 715 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
PRAME-214ENST00000543184 FGFR1OP2Q9NVK5 253 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 SERPINB13Q9UIV8 391 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
PRAME-214ENST00000543184 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 EPM2AIP1Q7L775 607 aaPredicted RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRAME-214ENST00000543184 RFFLQ8WZ73 363 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 KAT5Q92993 513 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 GH1P01241 217 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 DLG4P78352 724 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 NSMFQ6X4W1 530 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 ZSWIM2Q8NEG5 633 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 NSMCE1Q8WV22 266 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 MEIS2O14770 477 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 TBCAO75347 108 aaKnown RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 MMP13P45452 471 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 MAPK7Q13164 816 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 AGAP11Q8TF27 550 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 DYDC1Q8WWB3 177 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 FAM118BQ9BPY3 351 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 TYW1Q9NV66 732 aaKnown RBP15.3■□□□□ 0.04
PRAME-214ENST00000543184 TBK1Q9UHD2 729 aa15.3■□□□□ 0.04
PRAME-214ENST00000543184 MAST2Q6P0Q8 1798 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 TCP11X1B4DZS4 312 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 PDXKO00764 312 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 NEBLO76041 1014 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
PRAME-214ENST00000543184 FERP16591 822 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 VCAM1P19320 739 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 VPS41P49754 854 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 MMP14P50281 582 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 DGKZQ13574 1117 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 TRPM8Q7Z2W7 1104 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 HOOK3Q86VS8 718 aa15.29■□□□□ 0.04
PRAME-214ENST00000543184 EIF1ADQ8N9N8 165 aaKnown RBP15.29■□□□□ 0.04
PRAME-214ENST00000543184 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms