RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IGSF3O75054 1194 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 H2AFYO75367 372 aaKnown RBP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 SLC9A1P19634 815 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 HMGA2P52926 109 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 DGCR2P98153 550 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 PABPC4Q13310 644 aaKnown RBP eCLIP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 DGKDQ16760 1214 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 MIIPQ5JXC2 388 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 GCDHQ92947 438 aaPredicted RBP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 RPL10LQ96L21 214 aaKnown RBP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 PUS7Q96PZ0 661 aaKnown RBP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 SLC52A1Q9NWF4 448 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 B4GALT6Q9UBX8 382 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 RBM8AQ9Y5S9 174 aaKnown RBP6.93□□□□□ -1.3
XRCC4-206ENST00000542685 ABCA8O94911 1581 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 NPC1L1Q9UHC9 1359 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 NCOA3Q9Y6Q9 1424 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 A0A1W2PRX2 142 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 SSR1P43307 286 aaKnown RBP6.92□□□□□ -1.3
XRCC4-206ENST00000542685 KCNJ4P48050 445 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 SESN2P58004 480 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-206ENST00000542685 IL17DQ8TAD2 202 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 GFM2Q969S9 779 aaKnown RBP6.92□□□□□ -1.3
XRCC4-206ENST00000542685 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-206ENST00000542685 MRIQ9BWK5 157 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 KCMF1Q9P0J7 381 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 CEP83Q9Y592 693 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 PIK3C2GO75747 1445 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 IFT140Q96RY7 1462 aa6.92□□□□□ -1.3
XRCC4-206ENST00000542685 FAM135AQ9P2D6 1515 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 MYOM1P52179 1685 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 SPHKAPQ2M3C7 1700 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 PMS2P1A4D2B8 440 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 C2orf78A6NCI8 922 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 ACRV1P26436 265 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 ADCY7P51828 1080 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 ADGRE4PQ86SQ3 457 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 RPAINQ86UA6 219 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 NME9Q86XW9 330 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 NGEFQ8N5V2 710 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 UBXN4Q92575 508 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 RABGGTAQ92696 567 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 LPPQ93052 612 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 SLC7A6OSQ96CW6 309 aaPredicted RBP6.91□□□□□ -1.3
XRCC4-206ENST00000542685 PSMD1Q99460 953 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
XRCC4-206ENST00000542685 SLC6A15Q9H2J7 730 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 PIF1Q9H611 641 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 SMC4Q9NTJ3 1288 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 TDRD9Q8NDG6 1382 aaKnown RBP6.91□□□□□ -1.3
XRCC4-206ENST00000542685 C9orf84Q5VXU9 1444 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 GRIN2AQ12879 1464 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 MAGI1Q96QZ7 1491 aaPredicted RBP6.91□□□□□ -1.3
XRCC4-206ENST00000542685 MRC2Q9UBG0 1479 aa6.91□□□□□ -1.3
XRCC4-206ENST00000542685 APOL3O95236 402 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 C1SP09871 688 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 CCDC172P0C7W6 258 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 BPIFB4P59827 614 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 PTH1RQ03431 593 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 KLF10Q13118 480 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 EPHA7Q15375 998 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 ANKRD53Q8N9V6 530 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 TOMM22Q9NS69 142 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 DIAPH3Q9NSV4 1193 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 OXSMQ9NWU1 459 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 MAGEC2Q9UBF1 373 aaPredicted RBP6.9□□□□□ -1.3
XRCC4-206ENST00000542685 DNAI1Q9UI46 699 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 ING1Q9UK53 422 aaPredicted RBP6.9□□□□□ -1.3
XRCC4-206ENST00000542685 KIF16BQ96L93 1317 aa6.9□□□□□ -1.3
XRCC4-206ENST00000542685 DUOX2Q9NRD8 1548 aa6.9□□□□□ -1.31
XRCC4-206ENST00000542685 SHROOM2Q13796 1616 aa6.9□□□□□ -1.31
XRCC4-206ENST00000542685 RFPL3O75679 317 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 NEK4P51957 841 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 CBX1P83916 185 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 TCIRG1Q13488 830 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 MYBPC3Q14896 1274 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 LSM12Q3MHD2 195 aaKnown RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 SPTY2D1Q68D10 685 aaPredicted RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 ESRP1Q6NXG1 681 aaKnown RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 ANKRD7Q92527 254 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 RPGRQ92834 1020 aaKnown RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 WDR92Q96MX6 357 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 PCED1AQ9H1Q7 454 aa6.89□□□□□ -1.31
XRCC4-206ENST00000542685 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 HECAQ9UBI9 543 aaPredicted RBP6.89□□□□□ -1.31
XRCC4-206ENST00000542685 SH3BP1Q9Y3L3 701 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms