RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 BRCA1P38398 1863 aaKnown RBP10.4□□□□□ -0.75
MRPS35-204ENST00000542199 A1BGP04217 495 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 IGFBP6P24592 240 aaPredicted RBP10.39□□□□□ -0.75
MRPS35-204ENST00000542199 HERVK_113P62684 666 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 NKX3-2P78367 333 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 TERF2Q15554 542 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 BRDTQ58F21 947 aaPredicted RBP10.39□□□□□ -0.75
MRPS35-204ENST00000542199 XP32Q5T750 250 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 IQSEC1Q6DN90 963 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 ZC3H18Q86VM9 953 aaKnown RBP10.39□□□□□ -0.75
MRPS35-204ENST00000542199 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
MRPS35-204ENST00000542199 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 PLEKHF1Q96S99 279 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 HSPBP1Q9NZL4 362 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 CARMIL3Q8ND23 1372 aa10.39□□□□□ -0.75
MRPS35-204ENST00000542199 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 PRAMEF22A3QJZ6 481 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 SEMA7AO75326 666 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 CAMTA2O94983 1202 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 HMGB1P09429 215 aaKnown RBP10.38□□□□□ -0.75
MRPS35-204ENST00000542199 SNRPA1P09661 255 aaKnown RBP10.38□□□□□ -0.75
MRPS35-204ENST00000542199 LIMS1P48059 325 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 MTMR1Q13613 665 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 STK32CQ86UX6 486 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 USP16Q9Y5T5 823 aa10.38□□□□□ -0.75
MRPS35-204ENST00000542199 ALG1L2C9J202 215 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 N4BP3O15049 544 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 CYP17A1P05093 508 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 CYP2C8P10632 490 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 FNTBP49356 437 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 PHC1P78364 1004 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
MRPS35-204ENST00000542199 TARBP2Q15633 366 aaKnown RBP10.37□□□□□ -0.75
MRPS35-204ENST00000542199 PHF19Q5T6S3 580 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 B3GNT8Q7Z7M8 397 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 RTN4RL1Q86UN2 441 aaPredicted RBP10.37□□□□□ -0.75
MRPS35-204ENST00000542199 FERMT3Q86UX7 667 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 CNTD1Q8N815 330 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 HIPK4Q8NE63 616 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 FOXRED1Q96CU9 486 aaPredicted RBP10.37□□□□□ -0.75
MRPS35-204ENST00000542199 SCN7AQ01118 1682 aa10.37□□□□□ -0.75
MRPS35-204ENST00000542199 ARFGEF1Q9Y6D6 1849 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.36□□□□□ -0.75
MRPS35-204ENST00000542199 ZNF839A8K0R7 811 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 ULK1O75385 1050 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 MPIG6BO95866 241 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 PFKLP17858 780 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 DLG4P78352 724 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 PFKPQ01813 784 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 RALBP1Q15311 655 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 PRAMEF18Q5VWM3 479 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 CILP2Q8IUL8 1156 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 GORASP1Q9BQQ3 440 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 BRIP1Q9BX63 1249 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 CCDC8Q9H0W5 538 aaPredicted RBP10.36□□□□□ -0.75
MRPS35-204ENST00000542199 UCKL1Q9NWZ5 548 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 FAN1Q9Y2M0 1017 aa10.36□□□□□ -0.75
MRPS35-204ENST00000542199 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
MRPS35-204ENST00000542199 H0YIN7 160 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 HSP90B1P14625 803 aaKnown RBP10.35□□□□□ -0.75
MRPS35-204ENST00000542199 LSP1P33241 339 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 PIP4K2AP48426 406 aaPredicted RBP10.35□□□□□ -0.75
MRPS35-204ENST00000542199 ITGA1P56199 1179 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 MESP2Q0VG99 397 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 EPHA7Q15375 998 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 VASNQ6EMK4 673 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 C2CD5Q86YS7 1000 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 TTLL6Q8N841 843 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 ZNF610Q8N9Z0 462 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 ZSWIM3Q96MP5 696 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 SEMA4AQ9H3S1 761 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 MIS18AQ9NYP9 233 aa10.35□□□□□ -0.75
MRPS35-204ENST00000542199 ETV2O00321 342 aaPredicted RBP10.34□□□□□ -0.75
MRPS35-204ENST00000542199 PTGS1P23219 599 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 SESN3P58005 492 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 LRRC32Q14392 662 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 CMIPQ8IY22 773 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 CNBD1Q8NA66 436 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 PNISRQ8TF01 805 aaKnown RBP10.34□□□□□ -0.75
MRPS35-204ENST00000542199 KCNN1Q92952 543 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 SCYL1Q96KG9 808 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
MRPS35-204ENST00000542199 NGRNQ9NPE2 291 aaKnown RBP10.34□□□□□ -0.75
MRPS35-204ENST00000542199 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
MRPS35-204ENST00000542199 ASB1Q9Y576 335 aa10.34□□□□□ -0.75
MRPS35-204ENST00000542199 GOLGA6L22H0YM25 854 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 HSPA6P17066 643 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 CD40P25942 277 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms