RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NOMO2Q5JPE7 1267 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 RRAGBQ5VZM2 374 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 SLC27A1Q6PCB7 646 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
YBX3-212ENST00000542002 ZBTB8OSQ8IWT0 167 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 LARP4BQ92615 738 aaKnown RBP10.73□□□□□ -0.69
YBX3-212ENST00000542002 P2RX5Q93086 422 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 MRPL38Q96DV4 380 aaKnown RBP10.73□□□□□ -0.69
YBX3-212ENST00000542002 PRIMPOLQ96LW4 560 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 DRC1Q96MC2 740 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 FIZ1Q96SL8 496 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 C11orf84Q9BUA3 381 aaPredicted RBP10.73□□□□□ -0.69
YBX3-212ENST00000542002 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 C2orf40Q9H1Z8 148 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 NRDE2Q9H7Z3 1164 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 KMT5AQ9NQR1 393 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 KCND2Q9NZV8 630 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 INPP5FQ9Y2H2 1132 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 RWDD3Q9Y3V2 267 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 CNTNAP2Q9UHC6 1331 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 ABLIM1O14639 778 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 CUTAO60888 179 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 FGF18O76093 207 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 POMCP01189 267 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 MAPTP10636 758 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 ITGA4P13612 1032 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 GTF2F1P35269 517 aaKnown RBP eCLIP10.72□□□□□ -0.69
YBX3-212ENST00000542002 ZNF131P52739 623 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 EFNA5P52803 228 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 BCAR1P56945 870 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 NCBP1Q09161 790 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 DMP1Q13316 513 aaPredicted RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 E2F4Q16254 413 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 SPOUT1Q5T280 376 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 KCNT2Q6UVM3 1135 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 GLB1LQ6UWU2 654 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 ABI1Q8IZP0 508 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 PDILTQ8N807 584 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 POF1BQ8WVV4 589 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 STAMQ92783 540 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 DNAJC19Q96DA6 116 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 PGBD4Q96DM1 585 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 CCDC51Q96ER9 411 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 ZBTB45Q96K62 511 aaPredicted RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 GAD1Q99259 594 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 ACO2Q99798 780 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 TARS2Q9BW92 718 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 RSAD1Q9HA92 442 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 C17orf75Q9HAS0 396 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
YBX3-212ENST00000542002 PCDHB12Q9Y5F1 795 aa10.72□□□□□ -0.69
YBX3-212ENST00000542002 INPPL1O15357 1258 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 GALTP07902 379 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 PROZP22891 400 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 IGFBP6P24592 240 aaPredicted RBP10.71□□□□□ -0.69
YBX3-212ENST00000542002 MLH1P40692 756 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 SLC11A1P49279 550 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 NCKAP1LP55160 1127 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 TFF2Q03403 129 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 TCEAL5Q5H9L2 206 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 ATL3Q6DD88 541 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 DYMQ7RTS9 669 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 SLC39A11Q8N1S5 342 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 LRRC43Q8N309 656 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 DDX12PQ92771 950 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 VN1R3Q9BXE9 311 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 HAPLN2Q9GZV7 340 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 CCDC39Q9UFE4 941 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 ODF2LQ9ULJ1 636 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 TNFSF13BQ9Y275 285 aa10.71□□□□□ -0.69
YBX3-212ENST00000542002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 F8W810 466 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PTGESO14684 152 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 N4BP3O15049 544 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 ZC3H11AO75152 810 aaKnown RBP eCLIP10.7□□□□□ -0.7
YBX3-212ENST00000542002 LAG3P18627 525 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 NMT1P30419 496 aaKnown RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 STAT6P42226 847 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 ME1P48163 572 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 SCNN1GP51170 649 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 HYAL1Q12794 435 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 BECN1Q14457 450 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PTPROQ16827 1216 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms