RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 KCTD10Q9H3F6 313 aa8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 PCIF1Q9H4Z3 704 aa8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 AZI2Q9H6S1 392 aa8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 DBR1Q9UK59 544 aaKnown RBP8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 DIS3Q9Y2L1 958 aaKnown RBP8.5□□□□□ -1.05
AC005840.3-201ENST00000541888 CASP8AP2Q9UKL3 1982 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 IGKV6D-21A0A0A0MT36 114 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 B4DLN1 442 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 PGK1P00558 417 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 ZNF865P0CJ78 1059 aaPredicted RBP8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 CASP4P49662 377 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 CLCN3P51790 818 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 APBA1Q02410 837 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 EMC2Q15006 297 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 PLCB4Q15147 1175 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 CENPPQ6IPU0 288 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 EPM2AIP1Q7L775 607 aaPredicted RBP8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 TLK2Q86UE8 772 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 GUF1Q8N442 669 aaKnown RBP8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 ASAP3Q8TDY4 903 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 CNOT6LQ96LI5 555 aaKnown RBP8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 APBA2Q99767 749 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 LRRC27Q9C0I9 530 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 ABHD16BQ9H3Z7 469 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 VTA1Q9NP79 307 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
AC005840.3-201ENST00000541888 A0A1W2PRU2 124 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 SLC35F4A4IF30 521 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 TGFB1I1O43294 461 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 LYPLA2O95372 231 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 GH1P01241 217 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 EDN1P05305 212 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 MMP3P08254 477 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 GUCY2CP25092 1073 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 CCND3P30281 292 aaPredicted RBP8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 RGS2P41220 211 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 NPTX2P47972 431 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 CYP2J2P51589 502 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 ZNF131P52739 623 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 FCGRTP55899 365 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 TPM4P67936 248 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 SP3Q02447 781 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 SYCP1Q15431 976 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 ZCWPW2Q504Y3 356 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 XKR3Q5GH77 459 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 LRRC55Q6ZSA7 311 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 ZNF720Q7Z2F6 126 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 CCDC186Q7Z3E2 898 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 METTL13Q8N6R0 699 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 CPLX3Q8WVH0 158 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 CEP89Q96ST8 783 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 ZCCHC17Q9NP64 241 aaKnown RBP8.48□□□□□ -1.05
AC005840.3-201ENST00000541888 GOLGA8IPA6NC78 632 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 LRRIQ4A6NIV6 560 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 GOLGA8JA6NMD2 632 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SRGAP2CP0DJJ0 459 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 NR2F2P24468 414 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ZNF200P98182 395 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PSMD2Q13200 908 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 DUSP28Q4G0W2 176 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 FAM160B1Q5W0V3 765 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SARM1Q6SZW1 724 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 OTUD6AQ7L8S5 288 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 HAUS6Q7Z4H7 955 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 CDR2LQ86X02 465 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ELMO3Q96BJ8 720 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 DHTKD1Q96HY7 919 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 C16orf70Q9BSU1 422 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 MMRN2Q9H8L6 949 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ATP6V0A4Q9HBG4 840 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 FAM170AA1A519 330 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 DENND3A2RUS2 1198 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ANKRD63C9JTQ0 380 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 N4BP3O15049 544 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SLC26A4O43511 780 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 VTNP04004 478 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PLS3P13797 630 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 INSRRP14616 1297 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 MUTP22033 750 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 GLRA2P23416 452 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 MTIF2P46199 727 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 COPB1P53618 953 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 GABPB1Q06547 395 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 TBC1D8BQ0IIM8 1120 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 KNOP1Q1ED39 458 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 DNTTIP2Q5QJE6 756 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms