RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 AKAP3O75969 853 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 EPB41P11171 864 aaKnown RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 COL6A1P12109 1028 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 NAMPTP43490 491 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 PEX3P56589 373 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 LAMTOR4Q0VGL1 99 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 HS2ST1Q7LGA3 356 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 SLC9A9Q8IVB4 645 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 KSR1Q8IVT5 923 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TMEM161BQ8NDZ6 487 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TMEM174Q8WUU8 243 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 WNT8BQ93098 351 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 AGPAT3Q9NRZ7 376 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 ARHGAP28Q9P2N2 729 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 ADGRG1Q9Y653 693 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 CDK7P50613 346 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 CDK17Q00537 523 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 MYBPC2Q14324 1141 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TSR1Q2NL82 804 aaKnown RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 CDCA2Q69YH5 1023 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 WDR59Q6PJI9 974 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 SERINC5Q86VE9 423 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 BORCS6Q96GS4 357 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 AGPAT5Q9NUQ2 364 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
SMAD3-204ENST00000540846 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-204ENST00000540846 MKI67P46013 3256 aaKnown RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 EPHB6O15197 1021 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 CLIC2O15247 247 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 SLC16A4O15374 487 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 CYP2C9P11712 490 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 CASP4P49662 377 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 ETF1P62495 437 aaKnown RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 GTF2BQ00403 316 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 HAUS6Q7Z4H7 955 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 MYRIPQ8NFW9 859 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 HVCN1Q96D96 273 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 ACCSQ96QU6 501 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 IKZF4Q9H2S9 585 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 STARD7Q9NQZ5 370 aa13.61□□□□□ -0.23
SMAD3-204ENST00000540846 FAM207AQ9NSI2 230 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-204ENST00000540846 ALPK3Q96L96 1907 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 AFPP02771 609 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 VTNP04004 478 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 GNAT1P11488 350 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 TRIM65Q6PJ69 517 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 RHPN2Q8IUC4 686 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 C12orf56Q8IXR9 622 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 NEK11Q8NG66 645 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 BAP1Q92560 729 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 CHP1Q99653 195 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 ADAMTS10Q9H324 1103 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 TRMT13Q9NUP7 481 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 ZNHIT6Q9NWK9 470 aaKnown RBP13.6□□□□□ -0.23
SMAD3-204ENST00000540846 CEP72Q9P209 647 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 TANC1Q9C0D5 1861 aa13.6□□□□□ -0.23
SMAD3-204ENST00000540846 ARVCFO00192 962 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 GPR32O75388 356 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
SMAD3-204ENST00000540846 EDN1P05305 212 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 TMOD1P28289 359 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 GPC3P51654 580 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 POU5F1BQ06416 359 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 SNX17Q15036 470 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms